Helianthus annuus (common sunflower): 110920785
Help
Entry
110920785 CDS
T05101
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110920785
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
90S particles
Other 90S particles
110920785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
110920785
NCBI-ProteinID:
XP_022020674
LinkDB
All DBs
Position
17:complement(190067457..190073172)
Genome browser
AA seq
510 aa
AA seq
DB search
MMNRKKFKNKQTQNSHKSKRLKSEKPDPFFTGDSNRRKKFEDDDVSINSSDSEEYDDGHV
AAAENGGESEEETAGETRKRVAEAYLEKMRAVSRREEEDGEEVDERGGREDGDRDSMVAK
LLQAKQLEDSGRIRKLIASRVQKPKTTEGFRFQVKHRQSVTAVALSEDDSKGFSASKDGY
IVQWDVDTGKTETYVWPSEEVLKSHGAKDPQGRVKKRSKHVLALAVSSDGRYLASGGFDR
HIHLWDTRTREHIQAFPGHKGPVSCLTFRQGTSELFSGSYDRTIKIWNAEDRSYITTLFG
HQSDVLTIDCLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFINNDEFLSGS
DDGSIEHWSVLKKKPVHIVKNAHPSSTPNALDVKQNGDLSNGSKDDLDHVHEKLGQSACS
WVSSVAVCRGSDLAASGAGNGVVRLWEIENDGKGVHPLFELPLVGYVNSLAFAKSGKFLV
AGVGKEPRLGRWGAIPTARHGVAVHSLQLS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgcaagaagttcaagaacaagcaaacacaaaacagccacaaaagcaagcgg
ttgaaatccgaaaaaccagatccgttcttcaccggcgattcaaaccgccggaaaaagttc
gaagacgatgacgtcagcatcaacagcagcgattcggaggagtatgacgacggacatgtg
gcggcggcggagaacggaggtgaatcggaggaggagacggcgggggagacgcggaagcga
gtggcggaggcgtatttggagaagatgagagcggtttcgaggagagaggaggaggacggt
gaggaagttgatgaacgaggaggtagagaggacggagatagggattctatggttgctaag
ttgttgcaggcgaaacagcttgaagatagtggacgtattcgtaaattgattgcttctagg
gttcaaaaaccaaaaacaacagaaggatttcgatttcaagtgaaacaccggcaatctgtg
actgctgtggctttatcagaagacgattctaagggattctcagcgtcgaaagatggttat
atcgttcagtgggatgttgatactgggaaaacagaaacatatgtttggcctagtgaagaa
gtgttaaagtctcacggtgcaaaagatccacagggtcgagttaaaaagcgtagtaaacat
gttttagctcttgctgtaagctctgatggaaggtatttagcaagtggtggttttgatcgg
catattcatttatgggatacacgcacacgggagcatattcaggcttttccaggtcataaa
gggcccgtttcatgcttgactttcaggcaagggacttcggaattattctctggttcatac
gatcgaacaatcaaaatatggaatgcagaagacagatcgtacataaccacattatttggt
catcaaagtgatgttctaactatcgattgtttgagaaaagaacgtgtgctaaccgttggt
cgtgatcggaccatgcatctatggaaggttcctgaggagtcacagctagtctttcgggct
cctgcatcatcattagagtgctgctgttttattaacaatgatgaatttttatcaggctca
gatgacggtagtattgagcattggagtgtattgaaaaagaaacccgttcatattgtgaaa
aacgcgcacccttcatcaactccaaacgcactggatgttaaacaaaatggtgatttatca
aatggtagtaaagatgatttagatcatgttcatgaaaagctgggtcagtctgcttgttcg
tgggttagttctgttgctgtatgtagaggcagtgatcttgcagcatcaggagctggtaac
ggtgtcgttcgtctgtgggaaatagaaaatgatggtaaaggcgttcatccactttttgag
ctgccattggttggatacgtaaattctttggcatttgccaaatccgggaagtttttggtt
gctggagtcggcaaggaaccccgtttaggacgatggggggctattccgactgctcgacat
ggtgttgcagtgcactctttgcagctctcgtga
DBGET
integrated database retrieval system
