Helianthus annuus (common sunflower): 110921273
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Entry
110921273 CDS
T05101
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110921273
03083 Polycomb repressive complex
110921273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110921273
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110921273
Histone modification proteins
HAT complexes
HATB complex
110921273
HDAC complexes
Sin3A-HDAC complex
110921273
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110921273
PRC2.2
110921273
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110921273
Heterochromatin formation proteins
Other heterochromatin formation proteins
110921273
Chromatin remodeling factors
NuRD complex
110921273
NuRF complex
110921273
NuRF complex (fruit fly)
110921273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
110921273
NCBI-ProteinID:
XP_022021257
LinkDB
All DBs
Position
17:30183200..30185647
Genome browser
AA seq
400 aa
AA seq
DB search
MATEEDNGGEDYQVEEEFSVWRKNTPFLYDLVISHSLEWPSLTVQWLPSPPSLYPDGSFA
LHKMILGTHTSDDCPNFLLVAETHLPVNPASALETNLDNPKIPKVEVIQKIHVDGEVNRA
RCMPQIPSIIAAKTSSSEIYVFDTTKQPLDHEGGSCEPDVRLRGHDKEGYGLSWNPFREG
YLLSGSNDCKICLWDVSKMPDNKVLDATHVYQDHTSVVEDVSWHLMNDSLFGSVGDDCKL
MIWDLRTNKHEQAVVVHDKEVNYLSFNPFNEWVLATASSDTTVGLFDMRKLTSPLHVLSS
HEEEVFQVEWDPNHETVLASSAGDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNALQVWQMAESIYREDDDI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaggaagacaacggcggcgaagactaccaagtggaggaggaattcagcgtc
tggaggaagaacacacccttcttgtacgatctagtcatctctcactctctcgagtggccg
tcactcaccgtccaatggctcccctcaccgccctcgttgtatcccgacggctctttcgcc
cttcacaagatgatccttgggacccacacctccgatgactgccctaattttctcctcgtt
gcagaaacccacttgccggttaaccctgcatcggcacttgaaaccaatttggataatcca
aaaatccctaaggtagaggttattcagaagatacatgttgatggtgaggtcaaccgtgcg
aggtgtatgccacagattccctcaatcattgcagcaaaaaccagctcttctgaaatttat
gtgtttgacactacaaagcagcctttagatcatgaagggggttcttgtgaacctgatgtt
agattgaggggtcatgacaaagaaggttatggactatcgtggaacccttttagagagggt
tatctcttgagtggttctaatgattgcaaaatttgcttgtgggatgtgtccaaaatgcct
gacaataaagttctcgatgcaacacatgtatatcaggatcatacaagtgtggttgaagat
gtatcatggcatctgatgaatgatagtctgtttggatccgttggtgatgattgcaagcta
atgatttgggatttgcgcacaaataaacatgaacaagctgttgtagttcatgataaagag
gttaattacttatcttttaatccgtttaacgagtgggtcctggctactgcatcttcagac
actactgttggtctgtttgatatgcggaagctgacttcaccgttgcatgttttaagtagt
cacgaggaagaggtattccaggtggaatgggacccgaaccatgaaactgtgcttgcgtct
tctgcaggtgacagaaggttgatggtttgggatctaaataggattggagatgaacaactg
gaaggagaagcggaggatggcccgcctgagcttctgttttctcatggtggtcataaggca
aaaatatcagatttttcttggaacaagaatgaaccgtgggtcatatctagtgtggctgaa
gacaacgctttacaggtctggcaaatggcggaaagcatttatcgcgaagatgatgacatt
tga
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