KEGG   Helianthus annuus (common sunflower): 110921504
Entry
110921504         CDS       T05101                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03030  DNA replication
han03410  Base excision repair
han03420  Nucleotide excision repair
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110921504
   03410 Base excision repair
    110921504
   03420 Nucleotide excision repair
    110921504
   03430 Mismatch repair
    110921504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:han03032]
    110921504
   03036 Chromosome and associated proteins [BR:han03036]
    110921504
   03400 DNA repair and recombination proteins [BR:han03400]
    110921504
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110921504
  DNA Replication Termination Factors
   ELG1-RFC complex
    110921504
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110921504
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110921504
  Check point factors
   HRAD17(Rad24)-RFC complex
    110921504
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_lid_RFC1 AAA_assoc_2 AAA_16 AAA_22 AAA_11 ATPase_2 DUF815 AAA_14 AAA_5 AAA_30 AAA_24 DNAX_ATPase_lid nSTAND_NTPase5 RuvB_N AAA_7 ResIII AAA_19 AAA_3 AAA_2 nSTAND3 TniB SLFN-g3_helicase bpMoxR TIP49 Mg_chelatase nSTAND6 AAA_28 FtsK_SpoIIIE RNA_helicase AAA_25 VESA1_N
Other DBs
NCBI-GeneID: 110921504
NCBI-ProteinID: XP_022021532
LinkDB
Position
17:19986924..19991112
AA seq 360 aa
MAEVISLMDIDDDNTSLKPNNNKGKAVAAPPAHTKATPWVEKFRPQSLADVAAHRDIIDT
IDRLTSENKMPHLLLYGPPGTGKTSTILAVARKLFGSQMHNMVLELNASDERGIDVVRQQ
IQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIERYTKSTRFALICNNVNKI
IPALQSRCTRFRFAPLDAVNVTERLKYVINAEGLDVTEDGLAALVRLSNGDMRKALNILQ
STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEPFSDSFRKISDIKATKGLALVDIV
REVTMFVFRIKMPSDVRVHLINDLADIEYRLTFGCNDKLQLGSVISTFTRARSAIVAAAK
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggcggaagtgatctcgctaatggacatagacgacgacaacacatctctaaaacctaac
aacaacaagggcaaagccgtagccgcgccgccggctcacaccaaagccacgccatgggtc
gagaagttccgccctcaatctctagccgatgtcgccgcacatcgtgacataatcgatacc
attgataggcttacgagtgagaacaaaatgccgcatttgttgctgtatggaccaccggga
actggaaagacttcgactattttggctgtggctaggaagctttttggatcccagatgcat
aatatggttttggagcttaatgcgtctgatgaacgtgggattgatgtggttagacagcag
attcaggattttgctagtactcagagtttttcttttggtgcaaaagcctcggtgaagctg
gttctcttggatgaggcagacgcaatgactaaggatgcacaatttgctcttcgtcgagtg
attgagagatacacaaaaagcacgaggtttgcgcttatctgtaacaacgtgaacaagata
attccagcactacagtcaagatgcactaggtttcggtttgctcctctggatgcggttaat
gtcacagagcgacttaaatatgttattaatgctgaagggcttgatgtgactgaagatggg
ttagcagctcttgtacggcttagcaacggtgatatgaggaaggcgttgaacattttgcag
tcaacacatatggcgtctcagcagataaccgaagaagctgtctacctttgcactggaaat
ccattgcctaaagatattgagcagatatcttactggctactgaatgagccattttcagac
agctttcgaaaaatatctgatataaaggcaacaaaaggattggctttagtggacattgta
agagaagtaactatgtttgtttttagaatcaagatgccttcagatgttagagtccacctc
atcaacgacttggccgatatcgagtacaggttgactttcgggtgcaatgacaagttgcaa
ctgggctcggtgatttcaacttttacacgagccagatctgcaattgttgccgctgcaaag
tag

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