Helianthus annuus (common sunflower): 110922010
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Entry
110922010 CDS
T05101
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
han00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110922010
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
110922010
NCBI-ProteinID:
XP_022022035
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Position
2:complement(142098523..142103368)
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AA seq
1099 aa
AA seq
DB search
MASGSKKMNKATAQFRVDARLHAVYEQSGGSGKSFDYSQSLKTTSQSSNPEQQITEYLSN
IQRGGHIQPFGCMIAIDDSSFKVIAFSKNARERLGFVPQSVPSIEKQEVLTIGTEVKTLF
TPSSSVLLERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALS
IAGAVQSQKLAVRAISNLQSLPGGNIKLLCDTVVRNVRELTGYDRVMVYKFHEDEHGEVV
AESKRDDLDPYLGLHYPATDIPQASRFLFRQNRVRMIVDCHAMPVRVIQDDALMQPLSLV
GSTLRAPHGCHAQYMANMGSIASLAMAVIINEVDDENTGQRPSMRLWGLVVCHHTSARYI
PFPLRYACEFLMQAFGLQLNMELQLAAQMSEKHILRTQTLLCDMLLRDSLTGIVAQRPSI
MDLVKCDGAALYNQRRYYPLGVTPTEAQIKDIVEWLAACHQDSTGLSTDSLADAGYPGAA
GLGDAVCGMAVAYITSKNILFWFRSNTAKEIKWGGAKHHAEDKDDGQRMHPRSSFNAFLE
VVKSRSLPWENTEMDAIHSLQLILRDSFKDVDEYNSKSVVRTQVKELEMHGVDELSSVAR
EMVRLIETATAPILAVDVEGRINGWNAKVAELTGLSVENAMGKSLVQDLVYKESEETVAN
LLYRALRGQEDQNVEIKLRTFGSATEEPAVFLIVNACSSKDYAQNIVGVCFVGQDVTHQK
VVMDKFIQIQGDYKVIVHNPSTLIPPIFASDENMCCSEWNTAMERLTGWARADIIGKTLV
GEIFGSFCRLKGPDSLTKFMILLHNVIGGQDTDRYPFSFFDKHGNHVQVLLTANKRLNTG
GAAIGAFCFLQIASSELQQLLKVQMQQEKKSYIRMKELAYICHQIKNPLRGIGFANSLLE
ASGLTDDQKQLLETCVACEKQMFKIIKDVDKENIQEGFLEIVKHEFLLGSVIDAVVSQVM
LELLDRGLRLIRDIPENVKTLTVYGDQPRLQQVLINFLLNIVRHSPLHGGWIEIQVRPTL
KQASDGKNVVHIAFRIMSPGEGLPPELIKDMFDNSQWSTKDGLGLQMCRKILTLMNGEVQ
YIRESERCYFIIVLQLPPH
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaagtaaaaaaatgaacaaagccactgcacagtttagagttgatgcaaga
ctacatgctgtttatgaacaatctggtggctctggtaagtcttttgattactcgcaatca
ctcaaaaccacatcgcaatcgtcgaatcccgagcagcaaataactgaatatttatcaaat
atacaaagaggtggtcacatacaaccatttggttgcatgattgctatcgatgactcgagt
ttcaaagtcatcgcgtttagcaaaaatgctcgggagagactggggtttgtgccccagtct
gtcccgagcattgaaaaacaagaagtcttgactattggcactgaggtcaagactctgttc
accccctcgagctcagtgttgctggaacgggcttttcgggcccgagagattacacttttg
aacccagtttgggttcattcgaagaattcgggcaaacccttttatgcgattttgcatagg
attgatgttgggattgtgattgatttagagccggctcggactgaggatccagccctgtcg
attgccggggcggtccagtcgcaaaagcttgcggttcgggccatttcgaacttacagtcg
ttacccggtgggaatattaagttgttgtgtgataccgttgtgcgaaatgtgagggagctc
acgggttatgatcgggttatggtgtataagtttcacgaagacgaacacggtgaagttgtg
gcagagagcaaacgggacgatttagacccgtatttgggcttgcattatcccgcaacggat
atccctcaagcttcaaggtttttgtttagacaaaaccgggttagaatgatagttgattgt
cacgcgatgcctgttcgcgtgatccaagatgacgcgttgatgcagccgttgagcctagtg
ggctcgaccctccgggctcctcatggctgccacgcgcaatacatggctaacatgggctcc
atagcctcattagccatggcagttattattaacgaggtagatgacgaaaacacgggccaa
agaccgtcaatgcgactatggggactcgtcgtgtgtcatcacacgtcagctcgttacatc
ccattccctttacgctacgcgtgtgagtttttaatgcaagcattcgggctacaactaaat
atggaactacagttggccgcacaaatgtccgaaaaacacattttacgaacacaaacatta
ttatgcgatatgcttcttcgcgattcgctaacaggcatcgtggcgcaacgtccaagcatc
atggatctagtgaaatgtgacggtgcggcactttataatcaaagaaggtactacccgtta
ggggtaaccccgaccgaggcccaaatcaaagatatcgtcgagtggctagctgcgtgtcac
caagactcaaccggtttaagcacggatagtttagccgatgcgggttacccaggcgctgcg
ggtctaggggacgcggtttgtgggatggcagtggcttacattacctcaaaaaatatatta
ttctggttcagatcaaacacagcaaaagagatcaaatggggtggggctaaacatcatgcg
gaagataaagacgacggtcaacgaatgcatccgcggtcttcgtttaacgcgtttttagaa
gtggtgaagagtaggagtttgccatgggagaatactgaaatggatgcaattcattcattg
cagttaatcttgagagattctttcaaagatgtggatgaatataactcgaaaagtgttgtt
cgtacacaagttaaagagctcgagatgcacggtgtggatgagcttagctcggtggcccgt
gaaatggttaggttgattgagactgcgactgcgcctatactcgcagttgatgttgagggg
agaataaacgggtggaatgcgaaagtggcagagttgacaggcttgtcggttgagaatgcg
atggggaaatcgttggttcaagatcttgtttataaggaatcagaagaaaccgttgctaat
cttttgtatcgggcattaagaggtcaagaagatcaaaacgtggagatcaaactaaggacc
tttggctcagcaacagaagaacccgcagtttttttgatcgtcaacgcttgttctagcaaa
gattacgcacaaaacatagtcggtgtctgcttcgtgggccaagatgtcacacaccaaaag
gtggtcatggacaaattcatccaaattcaaggcgactacaaggtcattgttcacaaccca
agcacgctaattccaccaatctttgcatccgacgagaacatgtgttgctccgagtggaac
actgcgatggagaggctaaccggatgggcccgagccgacatcattgggaaaacattggtg
ggagagattttcggaagcttttgtcgtctaaaaggcccggactctttaacaaagttcatg
atccttttgcataatgtgatcggcggtcaagacaccgatagatacccgttttcgttcttt
gacaaacacggtaatcatgttcaggttcttttaaccgcgaacaaaagacttaacacgggt
ggagcagctatcggcgcattctgctttttacaaatcgcgagttctgagttacaacaactt
cttaaagttcaaatgcaacaagaaaagaaaagctatattagaatgaaagaattggcttac
atttgtcaccagatcaagaacccgttgcgtggaattggttttgcgaattctcttcttgaa
gcgtcgggtttaactgatgaccaaaagcagttgcttgaaacttgtgtggcttgtgagaaa
caaatgttcaagatcataaaagatgttgataaagaaaacatccaagagggttttttagag
attgtgaagcatgagtttttactagggagtgtgattgatgctgtggttagccaagtgatg
ttagagctgctggatagaggtctgcggctgatacgcgatattcccgagaatgtcaaaacg
ttgaccgtttatggtgatcaacctcggcttcaacaggtgttgatcaacttcttgttgaat
atagtgcgtcattcgccattacatggtggttggatcgaaattcaagttcgcccgaccttg
aagcaggcttctgatggaaaaaatgttgttcatattgcctttaggatcatgtctcctggt
gaaggccttccaccagaactgattaaagacatgtttgacaacagtcaatggtcaaccaaa
gacgggttaggactacaaatgtgtcgaaagattctaacgcttatgaacggtgaagtgcaa
tacattagagaatcagaaagatgttatttcattattgttcttcaacttccaccgcattga
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