Helianthus annuus (common sunflower): 110922176
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Entry
110922176 CDS
T05101
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110922176
Spliceosome [BR:
han03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
110922176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
ARM_7
Motif
Other DBs
NCBI-GeneID:
110922176
NCBI-ProteinID:
XP_022022179
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All DBs
Position
17:complement(2391700..2400699)
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AA seq
631 aa
AA seq
DB search
MAIECLVLGAGQEVGKSCVVVTINGKKIMFDCGMHMGYVDHRRYPDFSRISKSGDFDNAI
SCVIITHFHLDHIGALPYFTEVCGYTGPIYMTYPTKALAPLMLDDYRKVMVGRGEEQQFT
NDNILNCMKKVTAVDIKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMT
PDRHLGAAQIDRLRLDLLITESTYGKTIRDSKYAREREFLKAVHNCVASGGKVLIPTFAL
GRAQELCILLDDYWERMNLKVPIYFSSGLTIQANLYYKVLISWTSQKVKDTYATRNAFNF
KNVQSFERSLIHAPGPCVLFATPGMLSGGFSLEVFKHWAPCEYNLITLPGYCVAGTVGHK
LSDKTTKVDVDKDTQIDVRCKIHRLSFSPHTDEKGIMDLVNFLSPKNVILVHGDIINMDH
LKGRIESELGIHSYCPLNNETVSFPTTHFVKADASVKFIRSSLTPNFKFGKDEATEMAPV
QVCDERVTQGILTMETGQKVKILHQDEVLTMVGAEQTEVEFAYCFPLSLCRLKGHVTDDN
SLIRIVSGKISNEVVEFGVPDDMGVIQVNSFRLAVCKNDNCSFRISDGSTVSSDGTFFCC
NWSIADKDLAWRVISVMKNMDSSVDSVSVAL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagtgtcttgttctaggtgcaggacaggaggtgggaaagagctgtgtggta
gtaaccattaatgggaaaaagatcatgttcgattgcgggatgcatatgggttacgttgat
caccgtcgttaccccgatttctctcgcatttctaaatccggcgactttgataacgctatc
tcttgtgttatcatcactcattttcacttggatcatattggagcacttccatacttcact
gaagtttgtggttacactggacccatttacatgacgtatcctacgaaagctttggctccg
cttatgctggatgattacaggaaagtgatggttggaaggggagaagagcaacagtttacg
aatgacaacatccttaattgtatgaagaaagttactgcagtggatataaagcaaactgtg
caagttgataaagaccttcaaattcgtgcttactatgctggacatgtccttggagctgca
atgttttatgcaagtgtcggagatgctgctatggtttatacgggagattataacatgaca
cctgatagacatcttggtgcagctcaaattgaccgacttcgtttagaccttcttataaca
gagtcaacatatgggaaaactattcgtgattcaaaatatgctcgggagagagaatttctt
aaggctgtccataattgcgttgccagtggaggaaaggtgttgattcctacgtttgctctt
ggaagggctcaggaactctgtatattattggatgattattgggagcgaatgaatctcaag
gttcctatctacttctcttcaggtttgacgattcaagctaatttgtattacaaagtgctc
attagttggactagccagaaggtgaaagatacatacgctactaggaacgcattcaatttc
aaaaacgttcagagctttgaacgctcgttaatacatgctcctggaccatgcgttcttttt
gcgacacctggcatgcttagcggcggattttcactcgaagttttcaagcattgggcccca
tgcgaatataatcttatcacacttcccgggtactgtgttgcgggaaccgtgggtcacaag
ttgtctgataagaccacaaaagtcgatgtggacaaagatacacagatcgatgtccgctgc
aagattcatcgattgtcttttagcccgcacaccgatgaaaagggaataatggatcttgtc
aactttctatctccgaagaacgtaatacttgtacacggggatataataaacatggatcat
cttaaaggaagaatcgaatccgaactgggaatacactcctattgtccgttaaataacgaa
accgtatcttttcccacaacccattttgttaaagccgatgcctcggttaaatttatccgt
agttctttgacgccaaattttaagttcggaaaagatgaagctacggaaatggccccagta
caggtctgtgacgaaagggtaacccaagggattttaacgatggagacgggtcaaaaagtc
aagattttacaccaggatgaggttttaaccatggttggagccgaacaaactgaagttgag
tttgcttattgttttccgttaagtttatgcaggttgaagggtcatgttacggatgacaac
tcgttgattcgcattgtaagtggaaagatatcgaacgaagtggtcgaatttggggtaccg
gatgacatgggggttattcaggtgaactcttttcgtcttgcggtttgtaagaatgataac
tgttcttttagaattagtgatgggtctacggttagctctgacggtacgtttttttgctgt
aattggtcgattgcggacaaagatcttgcttggagagttatatctgtaatgaagaacatg
gattcaagtgttgattctgtttctgttgctttgtaa
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