Helianthus annuus (common sunflower): 110922397
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Entry
110922397 CDS
T05101
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110922397
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110922397
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
110922397
NCBI-ProteinID:
XP_022022401
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Position
6:41819664..41826291
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AA seq
429 aa
AA seq
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MSPLSRVYTCCIRKALLYMFQDPGFSSSLLALPFDVDSFGAKGDGKKDDTNAFKKAWKEA
CSSTTAAIFSVAKNKKYLVTPIRFEGPCRASLTMQISGTILASKQESKYKKNEKNWLRVE
GVDNLVVKGGGVIDGNGDIWWSKSCKVNKTLPCKDAPTALTFYKCKSLMLNNLTVQNAQK
IHVTFDRCENVQVSKIQVTALENSPNTDGIHVTHTQNIRISDSVIGTGDDCISIVNGSKN
VQATGITCGPGHGISIGSLGSKNSEAHVSNVKVDGAELTGTTNGVRIKTWQGGSGNASNI
TFQNINMKNVTNPIIIDQYYCDQAKPCKEQKSAVQIKYVTYENISGTSASKDAVIFKCSK
NYPCEGVVLKGINLTQEDDGDAKAICNNVKVTYVGTVIPRCSENLVQEQSTLMISYLYLE
KVSRNYFNT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctttcaagagtgtatacttgttgtataagaaaagccctactttacatgttt
caagatcctggtttttctagcagtttacttgcacttccatttgatgttgattcttttggc
gctaaaggcgatggcaaaaaagacgatacaaacgcattcaagaaggcatggaaggaagca
tgttcctccacaacagcagcaatatttagtgtggctaagaataagaagtaccttgtaaca
ccaattcggtttgaaggtccctgccgagcttcgttaaccatgcagatttcaggaacaatt
ttggcatccaaacaagaatccaagtataagaagaatgaaaagaattggcttagagtggaa
ggagtcgataacctcgtggtcaaaggaggtggcgtcattgacggcaatggggacatttgg
tggagtaaatcttgcaaagtcaataaaacgcttccatgtaaggatgccccaacggctcta
acgttctacaagtgcaaatctttgatgttgaataacctcacggttcaaaacgcgcaaaaa
atccatgttacgttcgaccgttgtgaaaacgtacaagtttcaaagattcaggtgactgcg
ctggagaatagccccaacacggatggaattcatgtcacacacacccagaacatcaggata
tctgactccgttataggaacaggggacgattgtatatcgattgtgaacgggtcaaagaat
gtccaagccactggtataacatgcggaccaggtcatgggattagtattgggagccttggg
tctaagaactcagaagctcatgtctcgaatgtcaaagttgatggggctgaacttactgga
accacaaatggtgttagaatcaagacttggcagggaggttcaggaaacgcaagcaatatt
acgtttcaaaatatcaacatgaagaatgtgacaaacccaatcattatagatcagtattat
tgtgatcaagctaaaccttgcaaagaacagaagtctgcggttcaaataaaatatgtgaca
tacgaaaatattagcggaactagtgcaagtaaagatgcagtaatatttaagtgcagcaaa
aactatccatgtgaaggtgttgtgttgaaaggtataaacctcactcaagaggacgatggt
gatgctaaggccatttgcaacaatgtcaaggtaacttatgttggaacagttattcctcga
tgctcggaaaatcttgttcaagagcaatcaacgttaatgataagttatttgtatctagag
aaagtttctagaaattatttcaatacttag
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