Helianthus annuus (common sunflower): 110922530
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Entry
110922530 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110922530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110922530
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110922530
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110922530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110922530
NCBI-ProteinID:
XP_022022515
LinkDB
All DBs
Position
2:143705975..143707431
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AA seq
273 aa
AA seq
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MSIVLPKSDSVQIREVWNDNLVEEFALIRQIVDDYPYIAMDTEFPGVVLRPLAHFKNIND
YNYVTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKPCIWQFNFREFNVNEDIFANDSIE
MLKQCGIDFKKNSEMGIDANRFGELLMSSGVVLNDNICWVTFHSGYDFGYLLKLLTCKEL
PKSQTGFFDLIKIYFPIIYDIKHLMRFCNHLHGGLNKLAEILEVERIGVCHQAGSDSLLT
SHAFKKLKEGYFNGNTEKYAGVLYGLGVEDGEK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgtgttgccaaaaagtgactctgttcagattagagaggtgtggaatgataat
cttgtggaagagtttgctttgattagacagattgttgatgattacccttatatcgcaatg
gataccgagtttccgggtgttgttcttcgtccattggcacacttcaagaatattaatgac
tataattatgtgactttgaaggataatgttgatatgttgaagttgattcagttgggtctc
actttttctgatgaggatgggaatttaccgacttgcggcaccgataagccgtgcatttgg
cagtttaatttccgcgagtttaatgttaatgaagatatctttgcgaatgattcgattgag
atgttgaagcagtgtgggattgattttaagaagaatagtgagatgggtattgatgcgaat
cggtttggggagcttttgatgtcttctggtgtcgtgttgaatgataatatctgttgggtt
acttttcatagcgggtatgatttcgggtacttgcttaagttgttgacttgtaaagaattg
cctaaatcgcaaacagggttctttgatctgatcaagatttattttccgattatttatgat
atcaaacatttgatgaggttctgtaaccatcttcatggtggactgaacaagcttgcggag
atcttggaagttgaaaggatcggtgtttgtcatcaggcagggtcggatagtttgcttact
tctcatgcgtttaagaagttgaaagaaggttactttaatgggaacacggagaagtatgct
ggcgtgttgtacggtttaggggttgaagatggtgaaaaataa
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