Helianthus annuus (common sunflower): 110922952
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Entry
110922952 CDS
T05101
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110922952
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110922952
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Nup120_160
NBCH_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
110922952
NCBI-ProteinID:
XP_022022839
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Position
17:complement(47844719..47848044)
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AA seq
509 aa
AA seq
DB search
METSKTRSTFHTITSRELNGFRVRKRPCFADDSSQFSRIGAFDYGVEDDVTPPMALSFCK
TSKNAHILAVTGEDGYVCLYNTRFKFSDSATSAENAEKARKCQWLAHDNAIFDVCWIKDD
TNLLTACGDHSIKVWDSQERKCLLALTGHTGSVKSVSAHPSNNDIIVSGSRDGSFALWDL
RCAKSTRAHSNTLPIATVQGAHKSSSVKTRGRHNKAASMSVTSVLYMKDEVSIATAGAVD
SVIKFWDTRSLKAPITQACSQDTSSRKWVRSYGISSLSQDLNGVYISASCMDSRIYLFNV
LQLEKGPVKSFEGSNIGTFFVKSKLSPDAGHIVGGSSDGFAYVWQVNKPQADPVKLEGHD
GEVTAVDWCAHEVGKIATAADDSVVQLWNINSSCYSNTRSPSSIRRRERTLPVMKRRKLF
TQEDEKDSNIGPDPDSPVELTVQTDSPNLTSIPEIRTPASLKKQLFSPHIRDACEGSPDA
SFGSPSSVLNPPPSIKRKTILDYFLAPSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccaaaactcgatccactttccataccatcacttccagagagctcaacggc
ttcagagtaaggaaacgaccgtgttttgccgacgactcgtctcaatttagtcgaatcgga
gcttttgattatggagttgaggatgacgtcactcctcccatggctttatccttttgcaag
actagcaaaaatgctcatattcttgctgtaactggagaggatggatatgtttgcttatac
aacactcgcttcaagttttctgattcagctaccagtgcagaaaatgcagagaaagctaga
aaatgccagtggcttgctcatgacaatgctatatttgatgtgtgttggataaaggatgat
actaatttactaacggcgtgcggtgatcatagtattaaagtatgggattcccaagaaaga
aaatgtcttctagcactaacgggacatactggaagtgtgaagtccgtaagtgcacaccct
tccaacaatgatatcattgtatctggttcaagagacggttcttttgctttgtgggacttg
aggtgcgctaaatctacgcgagcacactcaaatactctaccaatagcaactgttcaaggg
gctcataagtcatcgagtgttaaaacaaggggtaggcataacaaggctgcttcaatgagt
gttacatcggttttatatatgaaggatgaggtttccattgctactgctggagcagttgac
agtgttataaagttctgggatactagaagccttaaagctcccatcactcaggcttgttcg
caagatacatcatcaaggaagtgggtaagatcatacggtatttctagcttatcccaagat
ttaaacggagtatatatttcagcttcatgtatggacagcaggatatacctctttaatgtc
ctacaacttgagaagggacctgttaaaagttttgaaggatctaatatcggtacttttttt
gtaaagtcaaaactgagtcctgatgcaggccatattgttggtggttcgagtgacggtttt
gcctacgtatggcaggtaaacaaacctcaagcggatcctgttaagcttgaaggccatgat
ggagaagtgactgctgtcgattggtgtgcacatgaggtaggcaaaatagcaactgctgca
gatgattctgtggtccagctttggaacatcaacagcagttgttattcaaatacgagatct
ccctcatcgatacgaaggagagaacgaacgcttccggtgatgaaacgtagaaagcttttt
acacaggaagatgaaaaagattctaacataggacctgatcctgactctccagttgaatta
acggtccagaccgactctcccaatcttacatcgatacccgaaataagaactccagcatca
ctcaaaaaacagttattcagtccacatatcagagacgcttgtgagggatcccctgatgct
agttttggcagcccgtcttctgtgctaaatccgccaccctctataaaaagaaaaactatt
ttggattattttctagcaccgtcatcatag
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