KEGG   Helianthus annuus (common sunflower): 110923717
Entry
110923717         CDS       T05101                                 
Name
(RefSeq) uncharacterized protein LOC110923717
  KO
K12825  splicing factor 3A subunit 1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110923717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110923717
Spliceosome [BR:han03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110923717
 Complex B
    110923717
 Complex C
   U2 SnRNP specific factors
    110923717
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin PWI_ABCF3
Other DBs
NCBI-GeneID: 110923717
NCBI-ProteinID: XP_035842035
LinkDB
Position
17:12460361..12472345
AA seq 1579 aa
MLGSLPILPLPAPPADGDLGPLPPSQVENDSKDVHMQDGDDDPNKSNPPASIATHTRTIG
IIHPPPDIRTIVDKTASFVAKNGPEFEKRIIASNAGNPKFNFLNGSDPYHAYYQHRLAEF
RAQNQAPGQQSSQPSDAPDTEPAPSAAPADGNDATEKTDPSAKFRPVKKVLDPPEAEQYT
IRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSRENNNPQFHFLKPTHSMFMLFTSLA
DAYSKVLMPPKGLTDKLKKSVTDMTTVLERSLHRLEWERSQEQARQKAEDEIEQERLLMS
MIDWHDFVVVETIDFADDEDDDLPPPMTLEEVIRRSKMSAAVEEEVVEPGKEVEMEMDEE
EVQLVQEGMKAATLEENNEVETIKEENEPRMRIVKNYKRPEERLAAAAAAAERNPLNTVV
SPITGELIPVNEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRP
DIFGTTEEEVSNAVKAEIEKKNDEQQLPKQVIWDGHTGSIGRTATQAMSQNAGEDQIDGV
IDGRNLPGPAAPPPRPGIPSLRPLPPPPGLALNLPRVPPNAQYSTVNPPPRPGVNMMVSP
LRPPPQPMQMNYGQQQPYMMNRPPLPMGQPMSGNPPSIPVPPPPGSQFTPLAPRPFMPQH
GMPMVPPPPMPQGMPPPPPPEEAPPPLPEEPEPKRQRLDDSLLVPEDQFLAQHPGPVRIS
VSVPNVDEGNLKGQILEITVESLSESVSSLKEKIAGEIQLPANKQKLSGKAGFFKDNLSL
AYYNVAGGEMLSLSLRERGGRKRYYIIPKFPSAIPSPPSLSCGDKTTVGDLKPPSAALTP
PSIGNSRSMENSTPESVATHTRTIGIIHPPPDIRTIVDKTASFVVKTGPEFENRIIVRNA
GNPKFNFLNGSDPYHAYYQHRLAEFRAQALAPGQQSLDAPEPQSTPSAAPADSNDASDKT
DPSAKFRPVKEVLDPPEPEQYTIRLPDGITEEELDIITLTAQYVARNGKSFLTGLTSREN
NNSQFQFLKPNHSMFTLFTSLADAYSKVLMPPKGLNDKLKESVTDITTVIERCLHRLEWE
QSQEQARQKAEDEIEHERLIMLTIDWHDFVVVESIDFADDEDRYLPPLMTLEEVVMRSKI
SAAVDEEIVEPVKEVEMEMEMDEEEVQLVNEGMKAAAFEEYNGVDTIKEENEPWMRIVKN
YKRPEERLAAAAAAERNLANTVVSPITGELIPVNEMSEHMRISLIDPKYKEQKERMFAKI
RETTLALDDEISRNIVGLARTRPDIFGTTEEEVSNAVKVEIEKINDEQQQQIKQMIWDGH
TGSIGRTTTQVLSHNAAEDQIDGVTGGRNLPGPAALPPRHGVPSLRPLPPPPGLALNLPR
VSPNSQYPTVTPPPMSTINTTVTTLHPPPQPMQINYGQQPPYMMNRPPLPMGQSMTANPL
SIPVPPPPGSQFTPIVPPPPMPQGMLPPPPPEQAAPPPPDEPEPKRQKLDDSLLVPEDQF
MAQNPGPVRISVSVPNVGEGNLKGQVLEISVESLSESVGSLKEKIAGEIQLPCKQTETEW
EDGFFKRQYIACLLQRWRR
NT seq 4740 nt   +upstreamnt  +downstreamnt
atgttgggctcattgccgatattgcctctaccagcaccacccgcagatggtgatctaggt
cctctacctccatctcaagtagaaaatgattcaaaagacgtgcatatgcaggacggtgat
gatgatccaaataagtcaaatccacctgcatcaattgccacgcacacccgaacaatcggg
attatacatcctccccccgatatcagaaccatcgtcgacaaaaccgccagctttgtggcg
aaaaacggacccgagtttgaaaaaagaatcattgctagcaatgcaggaaatcccaagttt
aattttttgaatggttcagatccttatcatgcgtattaccagcatcgactggctgagttt
cgcgctcaaaatcaagccccgggccagcaatcatctcagccgtccgatgcaccggatact
gaaccagccccttctgccgctcctgcagatggcaatgacgcaaccgagaaaaccgacccg
tcagcgaagtttaggcccgtaaagaaagttcttgaccccccagaggctgagcagtacaca
attcggctccctgagggtattacaggtgaagagctggatataatcaagctcaccgcacaa
tttgtggcgcgaaatggaaaatcgtttttgactggattaactagtagagagaacaacaat
cctcagtttcattttttgaagcccacacacagtatgtttatgttgtttacatcgctagca
gatgcctactcgaaagttctaatgccgcctaaagggttgaccgataagctgaaaaaaagt
gtgaccgacatgaccactgtacttgaacggtctttacaccggctcgagtgggaacggtca
caagagcaggcgagacaaaaggcggaggatgagattgaacaggaaaggctgttaatgtct
atgatcgattggcatgattttgtcgttgtggagaccatagactttgcagatgatgaagac
gatgatctaccgcctccgatgacgttagaagaagttatacggaggagcaagatgtcggcg
gctgtagaggaagaggttgtggagcccgggaaggaagtcgaaatggaaatggatgaagaa
gaggtgcagcttgtgcaggaaggtatgaaggctgcaacgctcgaagagaataatgaagtc
gaaacaatcaaggaagaaaacgagccacgtatgaggatcgtgaagaactataagaggcct
gaagaaaggcttgcagcagcggctgcagctgcagagagaaacccacttaacactgttgtt
tccccaattaccggtgaattgattccggtcaatgagatgtcggaacacatgcgtatctct
cttattgacccgaagtataaggaacaaaaggagagaatgtttgccaagattagggagacg
acacttgcgcaagatgatgaaatttccagaaatattgtcgggcttgctcggacacgtccc
gatattttcgggaccacagaggaagaagtttctaatgcggttaaggcggagatcgaaaag
aaaaacgacgagcagcagctgccgaagcaggtgatttgggatgggcacactgggagtatc
ggccgtactgctactcaagctatgtcacaaaatgcaggtgaagatcaaatcgatggggtt
attgacggccgtaatcttcccggtccggcagcaccgccgcctagacctggtattccgtcg
cttcgcccgctacctccaccgcctgggcttgctttgaatctcccgcgtgtgccgcctaat
gctcaatactcgactgtaaatccgccacctcggcccggggttaacatgatggttagtcca
ctacgtcccccaccacagccaatgcagatgaattacggtcagcaacaaccttacatgatg
aatcggccgccactaccaatgggtcagcctatgagtggtaatccgcctagtattccggtg
ccgccgccacctggatctcagtttacacctcttgcaccccgccctttcatgccccagcat
ggcatgcctatggtccctccaccacctatgccgcaaggaatgccgccaccaccacctcca
gaggaagcccctcctccgcttcctgaagagcctgaaccaaagaggcaaaggcttgatgat
tctttgcttgtccctgaggatcagttcttggctcaacatccaggacctgttcgtattagt
gtgtcggtgccgaatgtcgatgaaggaaatctgaaagggcaaatactggaaattaccgtg
gagtcgttgtctgagagtgtaagcagtttgaaagagaagattgccggagagatacagctg
cctgcaaacaaacagaaactgagcggaaaggcaggttttttcaaagacaatctatcgctt
gcttattacaacgttgctggaggtgagatgctctctctgtctttaagagagcgtggtggt
aggaagaggtactatataataccaaagttcccctcagccattccgtcacctccaagtctc
tcttgtggcgataaaacaaccgtcggtgatctaaagccaccgtcagccgctctaacgcca
ccgtcgatcggtaactcccggagtatggaaaattccacccctgaatcagttgccacacac
acccgaacaattgggattatacatcctccccctgacatcagaaccattgtcgacaaaacc
gcaagctttgtggtaaaaaccggacccgagtttgagaatagaatcattgttaggaatgct
ggaaatcccaaatttaattttctgaatggttcagatccttatcatgcgtattaccagcac
cgactggctgagtttcgtgctcaagctctagccccagggcagcaatcattggatgcacca
gaaccccagtcaactccctctgctgctcctgcagatagcaatgatgcatccgataaaact
gacccgtcagctaagtttcgacccgttaaggaagttctggaccccccagaacctgagcag
tacacaattcggctccctgatggtattacggaagaggagttggatattattacgctcact
gcacaatatgtggcacgaaatggaaaatcttttttgactgggttaactagtagagagaac
aacaattcacaatttcaatttttgaagcccaaccacagtatgtttacgttgtttacatcg
ctagcagatgcctactcgaaagtgttaatgccgcctaaagggttgaacgataagctgaaa
gaaagtgtgaccgacatcaccactgtgattgaacggtgcttacaccgtcttgagtgggaa
caatcccaagagcaggcgagacaaaaggcggaggatgagatagaacatgaaagactgata
atgttaacaatcgattggcatgattttgttgttgtggagagcatagattttgcagatgac
gaagatcgttatttaccgcctttaatgacattagaagaagttgtaatgaggagcaagatt
tcggcagctgtagatgaagagattgttgaacctgtgaaggaagtggaaatggaaatggaa
atggatgaagaagaggtgcagcttgttaacgaaggtatgaaggctgcagcatttgaagag
tataatggtgtcgatacaattaaggaagaaaacgagccatggatgaggatcgtgaagaac
tataagaggcctgaggaaaggctagcagcagctgcagcagcagagagaaacctggcaaat
actgttgtttcaccgattactggtgaattgattccagtcaacgagatgtcggaacacatg
cgtatttctcttattgaccctaagtataaagagcaaaaggagagaatgtttgccaagatt
agggagactacacttgccctagatgatgaaatttcgagaaatattgtcgggcttgctcgg
acacgtcctgatattttcgggaccacagaagaagaggtttctaatgcagtcaaggtggag
atcgaaaagataaacgatgagcagcagcagcagattaagcagatgatttgggatgggcac
acagggagtattggccgcacgactactcaggtcctgtcacataacgcagcagaagatcaa
attgatggggttactggtggccggaatcttcctggtcctgcagcactgccgcctagacat
ggtgttccctcacttcgccctctacctccaccacctgggcttgctttgaatcttccccgt
gtgtcgcctaattctcaatacccgactgtcactccgccacctatgtccacgataaatacg
acggtaactaccctgcatcccccgccgcagccaatgcagattaattacggtcagcaacca
ccttacatgatgaatcggccaccactaccaatgggtcagtctatgactgccaatccgctt
agcattccggtgccgccaccacctggatctcagtttacacctattgttcctccaccacct
atgcctcaaggaatgctgccgccaccacctccagagcaagctgctcctccaccacctgac
gaacctgaaccaaagaggcaaaagcttgatgattctttgctagtccccgaggatcagttc
atggctcaaaatccgggacctgttcgtattagtgtgtcggtgccgaatgtcggtgaaggt
aatctgaaagggcaagtactggagattagtgtggaatcgttgtctgagagtgtaggcagt
ttgaaagagaagattgctggagagattcagctgccctgcaaacaaacagaaactgagtgg
gaagacgggttttttaaaagacaatatatcgcttgcttattacaacgttggcggaggtga

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