Helianthus annuus (common sunflower): 110924057
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Entry
110924057 CDS
T05101
Name
(RefSeq) probable pectate lyase 12 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110924057
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110924057
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110924057
NCBI-ProteinID:
XP_022023793
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Position
2:complement(151567475..151573755)
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AA seq
483 aa
AA seq
DB search
MEHRKTCIVVLHTLLLLRIAVATMEFKNLTLPGQHPSPELVSQDIQRKVNVSITRREMLA
YTNIDSSISCLTGNPIDDCWRCDPNWHLNRQRLADCGIGFGQYAAGGKGGRYYIVTDSSD
HDVINPRPGTLRYAVIQTEPLWIIFLTNMHIQLSQELIFNSFKTLDGRGANVHVTGGGCI
TLQYITNIIIHNIHIHHCYQSGNTMIRSSPTHFGYRTRSDGDGISIFGSRDIWIDHCSLS
HCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSDEYLPDSGMQVTIAFNHFGKSLVQR
MPRCRRGYIHVVNNVYSRWEMYAIGGSGNPTINSQGNRYTAPANRNAKEVQNFDKVTKRV
ETAQEHWKGWNWRSEGDILMNGAFFVASGEGLELKYEKAYSVEPKSAALIDQLTMNAGVL
GSRSNKLGKWTGGDGGVEDDENDYGEDSDGSSKPNTMNLISSLLIALLCFMFMCSSCDPV
MLL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagcatagaaaaacctgcattgtagtgttgcacactctcttactactgagaatagct
gttgcaacaatggagttcaagaatctaacactacctggtcaacacccttcccctgaactt
gtttctcaagatattcaaaggaaggtaaatgtatcaatcacaagaagagaaatgctagca
tacaccaacattgactcctcaatctcatgtttaaccggcaacccaatcgacgactgctgg
cggtgcgatccaaactggcatctcaaccgtcagcgcctggccgactgcggcataggcttc
ggccagtatgccgcaggcggcaaaggcgggcgttattacatcgtgaccgattcatccgat
cacgatgtaataaaccctcgccccggaaccctccggtacgcggtcatccaaaccgaaccc
ctttggataatcttcctaaccaacatgcacatccaactctcacaagaactcatcttcaac
agcttcaaaaccctcgatggccgcggcgcaaacgtccacgtcaccgggggcggctgcatt
actctccaatacataacaaacatcattatccacaacatccacatccaccattgttaccaa
tccggtaacaccatgatccggtccagcccgacccatttcgggtacagaacaaggtccgat
ggggacgggatatccatattcgggtcacgggacatttggatcgatcactgctcgttgtca
cattgtaaagacgggttgatagatgcggtgatgggttcaacagggattacgatatcgaat
aactttttttcgcatcatgatgaagtgatgctgcttgggcatagtgatgagtacctgccc
gattcgggtatgcaggtgaccatcgcgtttaaccattttggtaaaagtttggtgcaacgg
atgcctagatgccggcgagggtatatacatgttgttaataatgtgtattcgaggtgggag
atgtatgcgatcggagggagtgggaatccgacgattaatagtcagggtaaccggtatact
gctccggctaatcgtaatgctaaggaggtacaaaattttgataaagtgacaaagagggtg
gaaacagcacaagagcattggaagggatggaattggaggagtgaaggggatattcttatg
aacggggcgttcttcgtggcgtctggcgaagggttagagctaaagtacgagaaagcgtac
agtgtagagccgaaatcggctgccttgatcgatcaacttaccatgaacgccggcgtgctt
ggtagcaggagcaacaagcttgggaaatggaccggtggtgacggaggtgtagaggatgat
gaaaatgactatggtgaagatagtgatgggtcttctaagccaaatactatgaatttgatt
tcatctttattgattgcattgttatgtttcatgtttatgtgctcttcatgtgatccggtt
atgttattgtga
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