Helianthus annuus (common sunflower): 110925565
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Entry
110925565 CDS
T05101
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
han04812
]
110925565
Cytoskeleton proteins [BR:
han04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
110925565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
eIF2A
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_VPS8
Anillin_N
Beta-prop_RIG_1st
VPS8_N
zf-XS
Motif
Other DBs
NCBI-GeneID:
110925565
NCBI-ProteinID:
XP_022025184
LinkDB
All DBs
Position
17:19888569..19896612
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AA seq
786 aa
AA seq
DB search
MATTKRAYKLQEFVAHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNSVKLWDLTAGKLLH
DFKFHEGQVQCIDFHPNEFLMATGSADKTVKFWDLETLELIGSAGPETSGVRCMTFNPDG
RTLLCGLHESLKVFSWEPIRTHDAVDVGWSKLSDLNMHEGKLLGCSYNQSCVGVWVVDIS
RTEPYKVSKSNGHQEQISNSSGNLSVLTENTTKTSMGRLSVSQTSDSIVKETKSLARLSV
SQNSEPTNKDSKTFSSTGNAASIPQKIYPNVVNKISPTASVSAGSAPTASKRNVTKSQST
QNVSTFNRLDAAPVIVPRNNVDLRREGISGRVPPTIILSKTSDSRKFTNVKDEAEKPLSS
VQSVSDASDIESSRVADRNNFTSMKSMAFEIPAKESSFADDRSHQNVVTESTPSYQPEIY
EGRLPRANRDAFSMEKRRGRTRTLVSTWDRKERPPYHDTLSSRSISDSSSAVNKLSNTVK
QVPESTVKETGPASEDDIALDIMGQHDQFVSSMQTRLAKLQMIRRCWDRNDIKGAINALS
RMSDHAVTADIVSLLTEKIDTITLDVCSSLLPLLNSLLDSDMDRHRGVSIELLLKLVRVF
GSVIYSSLQASSPVGVDIEAEQRLERCNLCYLELEKVKRSLPLITRRGGTIAKSAHELNL
ALQEVS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccactaagcgcgcgtataagctacaggagtttgtagctcatgcttctactgtg
aattgtttgaagattgggaggaaatcttcaagagttcttgttactggaggtgaagatcat
aaggttaatctatgggctattggcaaaccaaatgctatactgagtttgtcgggccattcg
agtggaattgattcggtcagctttgattcttctgaagtacttgtagcagctggagctgca
agtggtacaattaagttgtgggatttagaagaagcaaagattgttcggacgcttactggt
catcgatccaattgtatatcattggatttccatccgtttggggagttttttgcttctgga
tctttagacacgaatttaaaaatatgggatataagacggaaagggtgtatacatacgtac
aaaggtcacacacggggtgtcaatgcgataagatttacacccgatggtcgttgggtagtt
tctggcggagaagacaacagtgtaaagctgtgggatttaactgcgggaaagctattacat
gatttcaagtttcatgaaggccaggtgcaatgcatagattttcatccaaacgagttcttg
atggcgacaggttctgctgataaaaccgttaagttttgggatctcgagactttagaactc
ataggttctgctggtccagagactagtggagtacgttgtatgacattcaatcctgatggg
agaacccttttatgtggtttgcatgagagccttaaggtgttctcatgggaaccaatcaga
acacatgatgctgtggatgtgggatggtcaaaactgtcggatcttaacatgcatgaaggg
aagcttctaggttgttcttacaaccaaagctgcgtaggagtttgggtcgtagatatctcg
cgaaccgagccatataaagtctcaaagtcaaatggtcatcaagaacaaatatctaactca
agtggaaacctctcagttttgactgaaaataccacaaaaactagtatgggccggctatcc
gtttcacaaacttcagattcaattgtgaaggaaacaaaatcgttagcgaggctttcagtt
agtcaaaactcggaaccaaccaacaaggattccaaaaccttttcatccacaggaaatgct
gctagtattcctcaaaagatttatccaaatgtcgtcaataagataagtccaactgcttca
gtttccgctggcagcgcaccgacagcttcaaaacgaaacgttacaaaaagccagtcaacg
caaaatgtatcaacttttaataggctagatgccgcacctgtaattgtgccaagaaacaac
gttgatttaagaagagagggtatttctggaagagtaccaccgacaattatactgtcgaaa
acatccgattctcgcaagtttacaaatgttaaggatgaagcagagaaaccgttatcgtct
gtacaatctgtgagtgatgcaagtgacattgaatcaagtcgagttgctgacagaaataat
tttacgtcaatgaaaagcatggcttttgaaattcccgcaaaggagtcaagctttgctgat
gacaggtctcaccagaatgtagtgacggagtcaactccaagctaccagcctgaaatatat
gaaggacgtcttccacgagcaaatagagatgctttctctatggaaaaacgaagaggaaga
acacgtacacttgtttctacttgggacagaaaagaaaggcctccttatcacgacactctt
tcttctagaagcatctctgatagtagctctgctgtcaataagctatcaaataccgtgaaa
caggtacctgaatccactgtgaaggaaacagggcccgcatcagaggatgacattgctttg
gatatcatgggacaacatgatcaattcgtatcctcgatgcagactcgtctggccaagcta
cagatgatccgtagatgctgggacaggaatgatattaaaggagcaattaacgcattgtcg
agaatgtctgatcatgctgtgactgcagatatagtcagccttttgaccgaaaaaatcgat
accatcaccttggatgtttgttcttctttactgcctctcctcaatagcctcctagatagt
gacatggataggcatcggggagtatcaatagaattactgcttaaacttgtacgggtattt
ggttcagtgatatattcttctttacaagcatcatcccctgttggtgttgatattgaggcg
gaacaaaggttggagcgatgcaacctgtgctatctggagcttgaaaaggtcaaacgttct
ttgccactcataacaagaaggggcggaacgatcgccaagtcagcgcatgagttgaatctt
gctcttcaagaagtctcatga
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