Helianthus annuus (common sunflower): 110925839
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Entry
110925839 CDS
T05101
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110925839
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110925839
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110925839
NCBI-ProteinID:
XP_022025359
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All DBs
Position
17:34447387..34449639
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AA seq
408 aa
AA seq
DB search
MMKQYSVLLFTLIYVFMVPSILARSVRNETNYEETDDKIAQLGITSTRRKLQQCAAENLI
DKCWRCKPDWAQNRQELAKCALGFAKGTTGGQGGEIYIVIDPSDDDAANPKTGTLRFGVI
QNKPLWITFEKDMIISLKHELVINKDKTIDGRGVKVEIANGAGFILPNITNVIIHGIHMH
DIKETEGGLIKAVEDKPAGPRHKTDGDGITIHGSSKIWIDHCSLSKGVDGLIDVTLGSTD
ITVSNCKFTQHQKVMLFGSDDKYLQDKNMQATVAFNMFTDGCDQRMPRCRLGLFQVVNNN
YDQWGFYALGGSAAPTILSHGNRFFAPNDPIKKNVVRKSDAPEAELMTWNWRSQKDSLEN
GAIFVPSGSDPTLTPVQQGLMIQAEPGESVPKLTSNAGALSCVPGQPC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagtattcagttttgctttttaccttaatctatgtttttatggtgccaagt
atcttagctcgatccgtgagaaatgaaaccaactatgaagaaactgatgacaaaatagcc
caactgggaataacttcaacaaggagaaaactgcaacaatgtgcagcagaaaacctaatc
gacaagtgctggaggtgcaagcccgactgggcacaaaaccggcaagaattagccaaatgc
gcacttggtttcgcaaaaggaaccaccggcggccaaggtggtgaaatctacattgtcatt
gatccttcagacgatgatgcggcaaatccaaagacagggaccctccgctttggtgtcatc
caaaataaacctttgtggatcacctttgaaaaagatatgatcatcagtttgaaacacgag
ttggtaataaataaagacaagacaattgatggtagaggtgtcaaagttgagattgcgaat
ggtgccggtttcatccttccaaacatcaccaatgtgatcattcatgggatccacatgcat
gatattaaagaaaccgaaggggggttgatcaaggctgtggaggataaaccggcagggccg
agacataagactgatggtgatggtatcaccatacatggttcttccaagatatggatcgac
cattgctccctcagtaagggtgtcgatgggctcattgatgtcaccttgggtagcacagat
ataacggtttccaattgcaaattcacccaacaccaaaaagtcatgttgtttgggtctgac
gacaaatatctacaagacaaaaatatgcaagctactgttgcattcaacatgttcactgat
ggatgtgaccaaagaatgcctagatgtcgattagggcttttccaggttgttaacaacaat
tatgaccaatggggattctacgccctcggtggcagcgcggccccaacaatactcagccat
ggcaacagattctttgcccccaatgaccctataaaaaaaaatgtcgtgaggaaatctgat
gcaccagaggcagagttgatgacatggaactggagatcacaaaaagactctcttgaaaat
ggagcaatctttgtgccatccgggtctgatccgacgctaacccctgtacaacaaggcctc
atgattcaagctgaaccaggggaatctgttccaaagctcaccagtaatgctggtgcacta
tcatgcgtgcccggacaaccttgttaa
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