Helianthus annuus (common sunflower): 110925907
Help
Entry
110925907 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110925907
04121 Ubiquitin system [BR:
han04121
]
110925907
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110925907
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110925907
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110925907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
IBR_1
zf-RING_5
zf-C3HC4_3
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
110925907
NCBI-ProteinID:
XP_022025397
LinkDB
All DBs
Position
1:complement(125870701..125872767)
Genome browser
AA seq
371 aa
AA seq
DB search
MEEDRELTRYWCHQCNMQVIPILGVETVKCSSCNGEFVEEMAGLISDHNHHEAGSDPDSD
PDRALSLWAPILLGMLNNRRGRRRFTHIGFDEDEEDEDRHADRLDPFERYRRYQFRHPNE
RSDLDLDRLREAAIRRQRRNDATAFQIFQGGRGGIGFESENNTDMENGAERNSNRRERVI
LINPFNQTIVVQGGGNPSQTHSIGSLGDYISGPGLEQLLQHLAENDPSRYGTPPARKEAI
DALPDVTIEEPSVQCSVCLDDFEVGTEAKELPCKHRFHSKCILPWLELHSSCPVCRLELP
SDESKLNQERNESGRSESDNVRNNRWFSASLPWPLNLFSSTSGPETGSLVTSTSASGSGS
PPRAHGEEDTH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacagagagttaacaaggtattggtgtcaccaatgtaatatgcaagttatc
ccaattttaggggtggaaacagtcaaatgttcatcttgtaatggtgagtttgtggaagaa
atggctgggttaatcagtgaccataaccaccatgaagctggttctgacccggatagtgac
ccagaccgtgcgctttcgttatgggcgcctatcttgcttgggatgttgaacaaccgccgt
ggtcgtagaaggtttacgcatattgggtttgatgaggatgaggaggatgaagaccgtcac
gctgaccgtcttgatccgtttgaacgttaccgtcggtaccagtttcggcatccgaatgaa
agatcggatttggatttggaccgtttgcgtgaggcggctattaggcggcagcggaggaat
gacgccacagcgttccagatctttcagggtggtcgaggcgggattggttttgaatctgaa
aacaacacggatatggagaacggggcggagaggaacagtaacagacgggaacgtgttatt
ctgattaacccttttaatcaaacgatcgtcgttcaaggcggcggaaacccgtcacagact
cactcgattggttctttaggtgattatatttcgggtccaggattagagcaactgctacaa
catttagctgagaacgacccgagcagatatgggaccccaccggcacgaaaggaagctatt
gatgcattgccagacgtaacaatagaggaaccttcagttcaatgttcggtttgtttggat
gattttgaggttggaaccgaggctaaagaactaccttgtaaacataggtttcatagcaaa
tgtatcttgccatggcttgagcttcatagctcgtgtcctgtttgccggttggagttgccg
tctgatgaatcgaaactcaatcaagaacgaaacgagtcaggtcgtagtgaatcggataat
gttaggaacaataggtggttttcggcttctcttccttggcctttgaatttattctcgtca
acatctgggcccgaaactgggagcttggtgacatcaacatcagcatcgggttcgggttca
ccaccacgggctcatggcgaggaagatactcactag
DBGET
integrated database retrieval system
