Helianthus annuus (common sunflower): 110926154
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Entry
110926154 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110926154
03041 Spliceosome [BR:
han03041
]
110926154
03036 Chromosome and associated proteins [BR:
han03036
]
110926154
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110926154
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110926154
mRNA cycle factors
Common to processing body (P body) and stress granule
110926154
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110926154
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110926154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110926154
NCBI-ProteinID:
XP_022025603
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All DBs
Position
2:complement(161173217..161181560)
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AA seq
630 aa
AA seq
DB search
MRTSWADAVENAASGSENNGAGGATAASSKPAYVPPHLRNRTPASSQVAGSAASQGSALA
TNDRSGQSGQTSGSRWAAPRYENGRSGYVTGGRGGGGGWGNRGGGWGGRDVEVNPFGNDD
IDSSEEIKTEQENSGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNNNIRRCKYVK
PTPVQRYTIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQFPQRPRGTRAVFPLAL
IISPTRELSCQIHEEARKFSYQTGVKVVVVYGGTPINQQLRELERGVDILVATPGRLVDL
LERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQTDMPPPGERQTMLFSATFPKEIQ
RLASDFLSNYIFLTVGRVGSSTDLIVQRVEFVQEVDKRSHLMDLLHAQKENDSHGKQALT
LVFVETKKGADSLEHWLYGNGFPATTIHGDRTQPEREQALRSFKSGKTPILVATDVAARG
LDIPHVSHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNLSLAKSLADLMQEAN
QEVPAWLTRYASRVSYGGGKNRRSGGRFGGRDFRKDNSYSGGGGYGGGGGGGYGGYGGGN
SGGYGGYGGGNSGGGYGGYSGGGGVPSAWD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggcagacgcggttgaaaacgcagcttcgggttctgaaaacaacggg
gctggtggggctacagcggcttccagcaagcctgcttacgttccgcctcatcttcgtaac
agaacacctgcatccagtcaagtagctggttcagctgcatcacagggttctgcactggct
actaacgataggtcaggacaaagcgggcaaacgagtggttcacgatgggctgctcctagg
tatgaaaacggtaggtcgggatacgttactggaggtcgtggcggtggcggtggttgggga
aatagaggtggtggttggggcggtagagacgtggaggttaatcctttcggtaatgacgat
atcgacagttctgaagagattaaaacagagcaggaaaacagcggtatcaatttcgatgcg
tacgaggatattcctgtggaaacgagtggtgaaaacgtaccacctccggttaatacattt
gcagagatagacttaggggaagctctgaataataatattagaaggtgcaaatatgtcaaa
ccgacacctgttcaacgttatacgattcccatatctcttgcgggtcgggatttaatggcg
tgtgctcaaactgggtcggggaaaacagcagcgttttgctttccgataatcagtggaatt
atgcggggccaatttccgcagagaccacgtgggacccgggctgtgtttccgcttgcgtta
attatatcccctacaagagaactctcctgccagatacacgaggaggcaaggaagttttcg
tatcagacaggtgtcaaggtggtggttgtttatggaggaacgccgattaatcaacagtta
cgagagctcgagagaggagttgatattctcgtcgccactccaggaaggttggttgattta
ttggagagggcaaaagtgtcattgcaaatgataaggtatctagctcttgatgaggctgat
cggatgttggatatgggattcgagcctcaaataagaaaaatagtcgagcaaacagacatg
cctccaccaggagaaagacaaacaatgttgttcagtgccacatttcctaaagaaatccag
agactggcatctgattttctatcaaattacatatttttaacggtgggtcgtgttggttca
agtaccgatttgattgtccaaagagtggaatttgttcaagaagttgacaaaagaagccat
cttatggacctccttcatgctcagaaggaaaatgattctcatggaaagcaagctcttaca
ttagtttttgtcgagacaaagaagggagccgattcacttgaacattggctgtacggtaat
ggattccctgctactacaattcatggtgatagaacacaaccggaaagggaacaagcactg
agatcattcaaaagcggaaaaacaccgattcttgtagcgactgatgtggcagcccgtggt
ctagacatcccacacgtttctcacgtggtcaactttgaccttcccaacgacattgatgac
tacgtgcaccgaataggacgaacaggtcgagctggcaagacgggattggctacagctttc
tttaatgaaaacaacttgtcattagcaaaatcattagcagacttgatgcaagaagctaat
caagaagtacccgcgtggctcactcgttatgccagtcgggtatcgtatggtggcggtaag
aacaggcggtctggagggcggtttggtggtcgtgattttagaaaggataactcttatagt
ggtggtggtggatacggcggtggtggtggtggtggatatggcgggtatggtggcggtaac
agtggtggatacggtggctatggtggtggtaacagtggaggtggatatggaggatatagt
ggtggcggtggtgtgcctagtgcttgggattag
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