Helianthus annuus (common sunflower): 110927083
Help
Entry
110927083 CDS
T05101
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110927083
09124 Replication and repair
03420 Nucleotide excision repair
110927083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110927083
03400 DNA repair and recombination proteins [BR:
han03400
]
110927083
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110927083
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110927083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Tfb4
IBR
Motif
Other DBs
NCBI-GeneID:
110927083
NCBI-ProteinID:
XP_022026375
LinkDB
All DBs
Position
2:168080993..168085372
Genome browser
AA seq
418 aa
AA seq
DB search
MSNNGKRKPVNEEEDDDEEDGNERDLEAWEKAYADERSWESLQEDESGLLRPIDNQALHH
AQYRRRLRSLSSASAASRIQKGLIRYLYLVIDLSKAAGEMDLRPSRMVVVAKQVEAFIRE
FFDQNPLSQIGLVVIKDGVAQCLTDLGGSPESHIKALMGKLGCSGEASLQNALELVHEQL
NQIPSYGHREVIILYSALSTCDPGDVMETIQKCKKSKIRCSVIGLSAEIYICKYLCQETG
GLYSVALDEAHLKDLILEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKFG
GGYICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPVTPFDDVAPMLVPNQHRRP
KSCFGCQQSLLNPGNMPVRCVTCPKCKQFFCLDCDIYIHESLHNCPGCESLRDSKSVN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacggcaaacggaagccggtgaacgaagaagaagacgacgacgaagaagac
ggaaacgagagagatctcgaagcatgggagaaagcatacgccgatgaaagatcatgggag
tcactccaggaagacgaatctggactccttcgtcccatcgacaatcaagcgttgcatcac
gcgcagtatcgccgtcgcctccgctcactctcctccgcctcagccgcctcacgtattcaa
aagggtcttattcgctatctctaccttgttatcgatctatctaaggcagctggagagatg
gatttacgcccaagccgaatggtggtagttgctaaacaagtagaggctttcatacgcgag
ttctttgaccaaaacccgttaagtcaaatcggtctagtagttataaaagacggggtcgct
cagtgcttaactgatctcggcggcagtcccgagtctcacatcaaagccctaatgggaaaa
ctcgggtgctcgggtgaagcgtcccttcaaaacgctttagaacttgtacacgagcaacta
aatcaaatcccgtcgtacggtcatcgggaagttattattttgtattcggctttgagtact
tgtgatcccggagatgtgatggagaccattcagaagtgcaagaaatcgaagattaggtgt
tcggttattggtctctctgcggaaatttatatatgcaagtatttatgccaagagaccgga
ggattatactccgttgctttggatgaggcgcatttaaaggatctaatattagagcatgcg
ccgccaccaccagctatagcggaattcgctatagctaatttaataaaaatgggattccca
caaagagccgcggagggtgttatctctatatgttcatgccataaagaagctaaatttggc
ggagggtacatttgtccaagatgcaaagcgcgtgtttgtgagctaccaaccgagtgtcgt
atttgtggtttgacacttgtttcctctccacatttggcacggtcgtatcaccatttgttt
cccgtaacaccttttgacgatgttgcccctatgcttgtgcctaatcaacatcgtcgaccg
aagagttgtttcggttgtcaacagtctcttttgaatcctggaaacatgccggttcgttgt
gttacttgccctaaatgcaaacaattcttttgccttgattgtgacatatacattcatgag
agtttgcataactgtccggggtgcgaaagcttacgagactccaaatcggttaattga
DBGET
integrated database retrieval system
