Helianthus annuus (common sunflower): 110927145
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Entry
110927145 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110927145
03041 Spliceosome [BR:
han03041
]
110927145
03036 Chromosome and associated proteins [BR:
han03036
]
110927145
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110927145
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110927145
mRNA cycle factors
Common to processing body (P body) and stress granule
110927145
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110927145
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110927145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
110927145
NCBI-ProteinID:
XP_022026451
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All DBs
Position
2:complement(170010071..170014181)
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AA seq
638 aa
AA seq
DB search
MPTSWADSVDAAEKAAAGGSYSVANSNSSSLSRNRPTYVPPHLRNRPSSSEAAVAPPPAV
ANSGPTSAAPAVGGGGGVGGGGGNRWAAPRNDFRSGYASGGRGGGGWNNRGGGWDRGRSR
EVNPFGDDDGTEQPFVEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNI
RRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQFGQRASRMP
RTACPLALILSPTRELSCQIHEEAKKFAYQTGVRVVVAYGGAPINQQLRELERGVDILVA
TPGRLVDLLERARVSLQYIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS
ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANG
VHGKQALTLVFVETKKGADSLEYWLCMNGFPATTIHGDRTQQEREQALRSFKSGNTPILV
ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDNNASMARPL
SDLMQEANQEVPAWLARYAARASYGGGKNRRGGGRFGGRDFRRDSNFNRGGGGGGDYYGG
GNMNNAYGGSGGYGGGYGASGGYGGGGGYGPGVASAWD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcttgggctgattcagttgatgcagctgagaaagcagctgctggtggttcg
tatagtgtagcgaattcgaattcaagttcgttatcccgaaaccgaccgacatacgttccg
ccgcacctgcgtaacaggccgtctagttcagaggcggcagtggcaccaccgccagctgta
gccaacagtgggcctacttctgctgctcctgctgtcggtggcggtggcggcgttggcggt
ggcggtggtaatcgttgggctgctcctagaaacgactttaggtccgggtacgctagtggt
ggacgcggtggcggtggttggaacaatcggggtggtggttgggaccgtggaagaagtcgt
gaggttaacccttttggagacgatgatggtacggaacaaccgtttgttgaacaggagaat
accgggattaacttcgatgcgtatgaagacattcccgttgagacaagtggcgacaatgtg
ccgccacctgtcaacacttttgccgagattgatttaggtgaagcgcttaatttgaacatt
aggagatgcaagtatgtgaaaccaacaccagttcagcgccacgcgataccgatctcgctt
ggtggtagggatttgatggcgtgtgcgcaaacagggtccggaaaaactgctgcgttttgt
tttccgattattagtggaataatgcgggggcagtttggtcaaagagcgtcgcggatgcct
cgtacagcgtgtccacttgctcttattctgtcaccgacaagggagttatcatgtcaaatt
catgaagaagctaagaagtttgcttatcaaaccggggtaagggtggttgttgcttacggt
ggagccccaattaatcaacagcttcgtgaactagagagaggtgtcgacattctcgttgca
acccctgggcggttggtagatttgttagagcgggcccgtgtatccctacaatacatcagg
tatttagcgttagatgaagctgacagaatgcttgatatgggtttcgaaccgcaaatacga
aaaattgttcagcaaatggacatgcctccgccaggtgtcagacaaacaatgttattcagt
gccactttccccaaggagatacagagattggcgtctgattttcttgcaaattatatattt
ttggctgtggggcgagtgggttcaagtacggatttgattgttcagagagttgaatatgta
caagaaagtgataaaagaagccaccttatggatcttttacatgcacaacgggccaatggt
gttcatggcaagcaagcgcttacattagttttcgtagagacgaaaaaaggtgccgattca
ctagagtattggttatgtatgaatggcttccctgccactactattcatggtgatagaaca
caacaggaacgtgagcaggcgttaagatcattcaaaagtgggaacacaccgattttggtt
gcaacagacgtagcagcacgaggtctcgacattccacacgttgcccacgtggtcaacttt
gacctaccaaacgacatcgatgactacgtgcaccgtataggaagaacgggccgggctgga
aagtcaggcctagccactgctttctttaacgacaataacgcctcgatggctagaccgtta
tcagatcttatgcaagaagctaaccaagaagttccagcttggctggctcgttatgccgct
cgagcttcttacggcggcgggaagaaccgccgtggcggtggtcggtttggcggccgtgat
ttccggagagactcaaatttcaaccgtggtggcggcggtggtggtgattattatggtggt
gggaatatgaataacgcttatggaggttctggcgggtatggcggcggttatggagcttct
ggcgggtatggtggcggcggtggttatggtcccggtgttgccagtgcttgggactga
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