Helianthus annuus (common sunflower): 110927146
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Entry
110927146 CDS
T05101
Name
(RefSeq) leucine-rich repeat extensin-like protein 5
KO
K13095
splicing factor 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110927146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110927146
Spliceosome [BR:
han03041
]
Complex A
Other components
Complex A specific factors
110927146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
110927146
NCBI-ProteinID:
XP_022026454
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All DBs
Position
2:complement(170002269..170008736)
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AA seq
655 aa
AA seq
DB search
MSSKVQPVSMEDNIQAGVTTTASVSSTASPKVSLFAKKSGFVIPKNKLSGSLVPAFRRNK
KPGGVDVESEDSTKQILRKTKWGPDLTQDAFVKKGRASAYQTRLDQITQQLKSGILEVGD
DVDHDSPTAQESSDRQSIVKSELEAERREVIGEILKLNPSFKAPPDYKPLLKEDKVVIPI
KENPGHNFIGLIFGPAGDTQKRLEKETGAKIRVYGTKAGTKKESEITSSDGNEVNGDYEK
LYVHVTAETYEKVDAAVSLIELLVTPVLANVVPVSTNDPVSGHNLTAVSLNQDTPVVVNT
GSGLDPPLARFQPYPNQWAPPGQSPRFIAPPFPTPPNSGPMSSSFSPRPVVSGPNMVHMH
NTGYPGPPRNPSLPPLPISAPTGPNPNVRPMGPASSRPVPPYTFPEQRPLTSSGWSQPPA
RTQMQPMARPQPSQPIPPPPPVGFRTGPPNPGPTSWFPSPTTPTSIPPPSIQSPPITPSV
RPQQPSSNDFTFQTNRAQSPSFRPGISNHVAPPVMQGFHRPQNSNQMGQHQGPGQGQQSV
FPGHGPRPPPNHLGPGPGPRQFGLGPPPIPFQPRPGNFGSAQQIQPGFRPQNLQPFRGNV
AYTMGRPGLNTSGPQQVYDPFSPTAVPHKHGNPQSSRKQDNDPEYDDLMASVGVK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaggttcaaccagtatccatggaggacaacattcaagctggcgtaacaact
actgcatctgtatcatcaacagcaagcccaaaagtttctctgtttgcaaaaaaatctgga
ttcgtaataccaaaaaacaagctatcaggttccctggtgcccgcttttcgtcgcaataaa
aagccaggtggcgttgacgtggagagcgaagacagtacgaaacagatactgagaaaaaca
aaatggggccctgatttgacacaagatgcttttgttaagaaaggaagagcttctgcatat
cagactagattggatcaaattacacaacaactaaaatctgggattctggaggtcggagat
gatgtcgatcatgattcacccacagctcaagaatcttcagaccgccaatctattgtgaaa
tcagagttggaagctgaaagacgtgaggttatcggagaaatacttaagctgaatccaagt
tttaaggccccacctgattacaagccattgttaaaagaggataaagttgtaattccaatc
aaagagaatcctggacacaattttattgggctaatatttggaccggccggtgatactcaa
aaaagattagaaaaggaaaccggggcgaaaatacgagtttatggaaccaaagccggtaca
aagaaagagagtgagataacttcatctgacggcaatgaagttaacggtgactatgaaaag
ttgtatgttcacgtgactgctgaaacttacgagaaagttgacgctgcggtttctctgatt
gagttactcgtcaccccagttttagcaaatgttgtacccgtttcgacaaacgatccagtt
tctgggcataatctaaccgcggttagtctcaatcaagacacacctgtggttgtaaataca
ggatccggactagacccaccgttagctcggttccagccatatcctaaccaatgggctcca
cccggtcagtcaccacggtttattgcaccgccttttccaacaccgccaaattccggaccc
atgtcatcatcattcagcccacgacccgttgtatctggaccaaatatggttcacatgcat
aatacgggttatcctggtccacctcggaatccttctttgccaccgttgccgatatcggct
ccaactggaccgaacccgaatgtgcgtccgatggggcctgctagttctcgaccagttcca
ccttatacgtttcctgaacaacgacctttaacgtctagtggttggtcccagccaccggct
cgaactcaaatgcaaccaatggctcgtcctcaaccatcacaaccaattccgccaccacca
ccagttgggtttcggaccgggccgcctaacccgggtcccacttcatggtttccgtcacca
acgacacccacatcgataccaccaccgtctatacagtcaccacccataaccccctccgta
agaccacagcagcccagttctaacgatttcacctttcaaaccaaccgtgcacaatcacca
tctttccgtccaggaataagcaatcatgtcgcgccacctgtcatgcaaggttttcatagg
ccacagaatagtaatcaaatgggtcaacatcaaggtcctggtcaaggtcaacagtcggtt
ttccctgggcatggtccacgaccaccacccaatcatttgggcccggggccggggcccagg
cagtttggtctgggtccaccacccattccgttccaacccaggcccggaaactttggatcg
gctcagcaaattcaaccagggtttcgaccccagaacctacagccatttcgtggcaatgtg
gcgtatactatgggcaggcctggtttgaacacatctggaccgcaacaggtgtatgatcct
ttttcgcctacggctgtgccacataagcatggtaacccacaaagttcgagaaaacaagat
aatgatcctgaatatgatgacttgatggcatctgttggagtgaaatga
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