Helianthus annuus (common sunflower): 110928502
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Entry
110928502 CDS
T05101
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03082
ATP-dependent chromatin remodeling
han03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110928502
03083 Polycomb repressive complex
110928502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110928502
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110928502
Histone modification proteins
HAT complexes
HATB complex
110928502
HDAC complexes
Sin3A-HDAC complex
110928502
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110928502
PRC2.2
110928502
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110928502
Heterochromatin formation proteins
Other heterochromatin formation proteins
110928502
Chromatin remodeling factors
NuRD complex
110928502
NuRF complex
110928502
NuRF complex (fruit fly)
110928502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
110928502
NCBI-ProteinID:
XP_022027206
LinkDB
All DBs
Position
3:2682670..2691382
Genome browser
AA seq
487 aa
AA seq
DB search
MEEASSPLSQPKKRGRPKGTKRSTTEEAETSPHKMKPTAAGNKKAAVVVDDKYSNWKSVV
PILYDWLANHNLMWPSLSCRWGPLLEQAKNKNRQRLYLSEQTDGSVPNTLVIANCDVVKP
KVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHTDCPEVLIWDIE
TQPNRHAVLGAAESHADLVLTGHADNAEFALAMCPTEPYVLSGGKDKYVVLWSIHDHIST
LTGESTNPPGSIVKTADNATLGPRGIFQGHTDTVEDVQFCPTSTQEFCSVGDDSCLILWD
ARVGTNPITKVEKAHNADVHCVDWNPHDANFILTGSADHSVCMFDRRNLTSDGVGSPVHK
FEEHKAPVLCVQWCPDKSSVFGSSAEDGCVNIWDYEQVGKKIERGTPNAAPGLFFKHCGH
RDKVVDFHWNVDDPWTVVSVSDDVETTSGGGTLQIWRMSDLIYRPRDEVLTELEDFKAHV
AGCGPKA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcttcatcgccattatcgcaacctaaaaagagaggaagaccaaagggcacc
aaacgctccaccaccgaagaagccgaaacttcacctcacaaaatgaaacctacggctgcc
ggaaacaagaaggctgccgtcgtcgttgacgataagtacagcaactggaagtccgttgta
ccgattctctacgactggcttgctaatcataacctcatgtggccttctctctcttgccgg
tgggggccgcttttggagcaagcaaagaacaagaacaggcagcgtttgtatctttcagaa
cagactgatggaagtgttccaaacacactagttatagcaaattgtgatgtagtgaagcca
aaagttgctgcagctgaacacatatctcagtttaacgaggaagcccgctctccgtttgta
aagaagtacaaaactataattcatccgggagaggtgaacagaatcagggaactgccacaa
aacaagaacatagttgctacacatactgactgccctgaggttcttatttgggatatcgaa
acacaacctaatcgtcatgctgttcttggagctgctgaatctcatgctgatttggtgctt
acaggacatgctgacaatgcagaatttgctcttgcaatgtgcccaactgaaccttatgta
ctctctggagggaaggataaatatgtggttttatggagcattcatgaccatatatctaca
ttaactggagagtcaaccaaccccccagggtctatcgtcaaaactgctgacaatgctact
ctcgggccacgtgggatctttcaggggcatacagatacagtcgaagatgtgcagttttgt
ccaacaagtacacaggagttctgtagtgttggagatgattcttgcttgatattgtgggat
gcaagagttggaaccaaccctatcacgaaggttgaaaaagcacacaatgctgatgttcac
tgtgtcgattggaatcctcatgatgcaaatttcattctaaccgggtcagctgaccactct
gtttgcatgtttgaccgccgaaacttaacttctgatggagttggctctcctgttcacaaa
tttgaagaacataaagctcctgttctatgcgtccagtggtgtccagacaagtcttccgtc
tttgggagctcagcagaggatggctgtgtaaatatctgggattatgaacaggttggtaaa
aagatagaacgtgggactccaaatgctgctccagggttgttctttaaacattgcggacac
agggacaaagtggtagacttccattggaacgttgatgatccatggaccgttgtaagtgta
tcagatgatgttgaaaccacgagtggtggtgggacccttcagatttggagaatgagtgat
ttgatatacagaccaagagacgaagtgttaaccgagttagaagacttcaaggctcatgtt
gcaggatgtggtccaaaggcttag
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integrated database retrieval system
