KEGG   Helianthus annuus (common sunflower): 110928566
Entry
110928566         CDS       T05101                                 
Name
(RefSeq) protein SMG7
  KO
K14409  protein SMG7
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110928566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110928566
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     110928566
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110928566
SSDB
Motif
Pfam: EST1_DNA_bind EST1 Piezo_THU9_anchor EPTP
Other DBs
NCBI-GeneID: 110928566
NCBI-ProteinID: XP_022027272
LinkDB
Position
1:complement(53468240..53475707)
AA seq 842 aa
MTIPMKNTSSNASRERAHLLYNKNAELEINRRKAAQAKVTSDPNAWQQMRENYESILLED
HAFSEQHDIEYALWQLHYKRIEDLRARYNSAQAFASQNAKGVARSGPDRITKIRSQFKTF
LSEATGFYHDLMVKIRAKYGLSLGYMSDDSQNDKDGNESIDVKKGLISCHRCLIYLGDLA
RYKGLYVEGDSKTRDFAAASSYYKQAATLVPSSGNPHHQLAILASYSGDELLSVYRYFRS
LAVDTPFTTARDNLIIAFEKNRQSYCQLLGDSKPAPIKKLPARMNGRGRNRGEARASLKD
RKTEPQIALEKDITVPETLKAFSIRFVRLIGILFTRTSLETFGDVFSLARTEFLHLLSSG
SDEVLNFGSDFNECKLFVTRFISIMIFTVYNANKETENQSYTEILQRSVVLQNAFTAIFD
FMALIVDRCFQLKDPSGSFLLPGIMIFTDWLAYCADNAVVTNRNNEMDEKQATARSLFWN
NFVSFLNKILSSFTGSHHEAVNRLALPEDIDLRGFLPLVPGQLALDFSRTNYFENDGNKE
KNSRVQRIVATGKAIATNIRLGQQGIYFDSRLNKFFYGVEPPHVEVSVINQEISEDVEDE
DEIIVFKPTVPEKHIEESSKGIIASSTDSLILPAGFSLQQFAQPNTSKPMMGKEDIENSF
SNLNLFNGQDHATVIPSKFDSVMTSASGYDSIPSNTKFRKSPVGRPVRHSGPPPGFHNPK
NRNENPNPALDDYSWLDGYQLPYAGSYSNDGFGNSFNGLPLPNKLLNTRKTSLGMECFPF
PGKQVSTTVPANTGIGNGNGWLDYQIPERSSLQEPVKTGNEQFLAVPQQYQGQSLWEGRF
FV
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgactattccaatgaaaaacacttcgagtaatgcatcaagggagcgtgctcatcttctt
tacaataagaatgctgagctggaaattaatcgtagaaaagcagcacaagcaaaagtcaca
tcagatccaaacgcatggcaacagatgcgagagaattacgagtcaatacttctagaagac
catgctttctctgaacaacacgacatcgaatacgctttatggcagttacattacaaacgt
attgaagacttacgcgcacgctataactctgctcaagcttttgcatcacaaaatgctaaa
ggcgtggcccgatctgggcccgaccgaatcaccaaaattcgttctcagtttaagaccttc
ttgtcagaagctactggattttatcatgatttgatggtgaaaattagggcaaaatatggg
ttatctctaggttatatgtcagatgactcacaaaacgataaagatggaaatgaatctatt
gatgtgaaaaaaggtctaatatcatgccatcgatgtcttatatacttaggggatcttgcg
cgttataaagggctgtatgttgagggtgactcgaaaactcgagattttgctgcagcgtca
agttactataagcaagctgctactcttgtgccttccagtggtaatccacatcatcagctt
gctattcttgcttcttattctggagatgagctgttgtctgtttaccgttattttcgaagt
ttagctgttgacaccccttttactactgcaagagacaatttgatcattgcatttgagaag
aatcgtcaaagttactgtcagctgcttggggattcgaaacctgctcctatcaaaaagtta
cctgcacggatgaatggaagaggaagaaacagaggtgaagcacgcgcttctctcaaggat
agaaaaacagaaccgcaaattgctctcgaaaaagacatcactgtccctgaaactcttaaa
gctttcagcattcgatttgtcagattaattggcattctttttactcgcacaagcttagaa
acttttggggacgttttctcattagcacggactgaatttcttcacctactatcttccgga
tcagatgaggtgctcaacttcgggtcagattttaacgagtgtaaacttttcgtaacccgg
ttcatatcaatcatgatattcacagtctacaatgcaaataaggaaaccgaaaatcaatca
tacaccgagattttacaacgttctgttgtgcttcaaaatgctttcaccgccatatttgat
ttcatggcgctcatagttgacagatgcttccaacttaaagacccttccggaagcttctta
cttcccggcatcatgattttcaccgactggctagcctattgtgcggacaatgctgtcgtg
accaatcgcaacaatgaaatggatgaaaaacaagcaacggctagatccctcttttggaac
aatttcgtttctttccttaacaagatattatcatcattcactgggtcccaccatgaagca
gtaaaccgtcttgcattgcctgaagacattgacttacgagggtttcttcctcttgttccg
ggccaactcgctctcgatttttctagaacaaattattttgaaaatgatggaaataaggaa
aagaactcgcgggtgcagcggatcgtagccactggaaaggctattgctacaaacattcgg
cttggtcaacaaggaatctattttgactcgagattaaataagtttttctacggagttgag
ccgccacatgttgaagtttctgttataaaccaagaaatcagtgaagacgttgaagacgaa
gatgagattattgtcttcaagcccactgtacccgagaagcatattgaagaatcatccaag
ggtattattgccagttccactgattccttaatcttacctgcgggtttttctttacaacag
tttgcacaaccgaacacatcaaaaccaatgatgggaaaggaagatatcgagaatagcttt
tcaaatctcaacttatttaacggacaggatcatgctactgtcataccatccaagtttgat
tcggtgatgacgtcagcatctgggtatgatagtatcccttcaaatacaaaatttcgtaag
agtccagtgggtcgacccgtgaggcactctggcccgccacctggcttccacaaccctaaa
aacaggaatgaaaatccaaatccagctttagatgattatagttggttggatgggtatcaa
ctgccctacgcaggatcatacagtaacgatggattcggtaattcctttaatggtctgcca
ctaccgaacaagcttttgaacacacgcaagacttcgttgggtatggaatgttttccattc
cctggcaaacaggtttccaccactgtgcctgccaacactggaatcggaaacggaaatgga
tggcttgattatcagattccggagcgttctagtcttcaagaaccagttaagacgggtaat
gaacagtttcttgctgtgcctcaacaatatcaaggtcaatcgttgtgggaaggtcgtttc
tttgtgtga

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