Helianthus annuus (common sunflower): 110928844
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Entry
110928844 CDS
T05101
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
han03012
]
110928844
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110928844
Translation factors [BR:
han03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110928844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
Helicase_C
DEAD
HA2_C
HA2_N
DSRM_DHX29
nSTAND3
ATPase
NPHP3_N
DND1_DSRM
AAA_19
AAA_22
Rad17
NB-ARC
Motif
Other DBs
NCBI-GeneID:
110928844
NCBI-ProteinID:
XP_022027581
LinkDB
All DBs
Position
3:84962913..84981754
Genome browser
AA seq
1442 aa
AA seq
DB search
MAPKKKQQQQQQQKQKQKSSSSSKNKPQSSTGPKLQISAENENRLRRLLLNSGRSTADPV
HEDSNLTKAQKAKKLHSVYEKLSCEGFTDDHIERALSHLKESATFEAALDWLCLILPPNE
LPLKFRSSTAALPSDGGSVGIISTARDDWAPLPDSSVATEHEIEEISFKSKVQRKVDTLD
SFQQSQADWIRQYMEQQEEDEYESWEDAAVDEASEPRSYDIIREEYHSARLQAISAKERK
DKKGQEQSGQIIRKLKQEMAALGISVDTLAAEFESRHRAIENQNVEAVTGGEDGCIESTV
EQVGPQDKETVTESCSTQDVLLSVRSQDGSVADEDSGDIELGDMFLEDSSSDQVLPPEIV
ELQKKEKMKELTSEKNLEKLEGIWKKGDPLKIPKAILQLLCQRSGWEAPKYNKVQGTRDG
SSYTVNVIRKASGRGKNRKVGGLTTVQLPTPGEAFETAEDAQNRVAAYALYQLFPDLPVH
LMMTDPYASLVLQWLEGDLSGNVKNIEVDRRAGFVDFLLNSDASDAVVSEDLLDTSRQID
SQISHVQEDTSARDAGFDKIAESTDYHKQVESSYLKKQQESKRKMKKYEDMLKSRATLPI
AELKGEILHRLKDNDVLVICGETGCGKTTQVPQFILDDMIEQGHGGICNIVCTQPRRIAA
ISVAERVADERCESSPGSKDSLVGYQVRLDSARTERTKLLFCTTGILLRMIVGNKSFADI
THVIVDEVHERSLLGDFLLIILKNFIEKQSAQRTQQKLKVILMSATVDSQLFSHYFGDCP
VIHAQGRTHPVTTHFLEDIHETIDYRLASDSPASLRSDIPRQKGAAVDNHRGKKNLVLSA
WGDESVLSKGYSNPYYVPENYQTYSEQTQQNLKKLNEDVIDYDLLEDLICHVDETYPEGA
ILVFLPGVSEIHTLLDKLAASYQFRGVASGWLLPLHSNIASSEQKRVFLRPPDDIRKIII
ATNIAETSITIDDVVYVIDCGKHKENRYNPRKKLSSMVEDWISRANARQRRGRAGRVKPG
ICFCLYTRYRFEKLMRPFQLPEMLRMPLVELCLQIKLLSLGRIMPFLQKALEPPTEEAIT
SAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMMLYGGIFGCLSPILSISAFLSYK
SPFIYPKDERHAVERAKLALLTDKSGGATDLDNGERQSDHLIMMIAYKKWEKILRENGSN
AAERFCKSYFLSSSVMYMIRDMRVQFGTLLADIGLIELPKNYQNGGKWKEKLDSWFSDTS
QTFNVYSNHLSVVKALLCAGLYPNVAATEQGISEKALNSLRQSAGPTTDDSNVWFDGRRV
VHIHPSSVNSNSKTFQHPFLVFLEKVETTKVFLRDTTITSPYSILLFGGSMNIQHQTGLV
IIDGWLKMAAPAQTAVLFKELRLTLHSILKELIRKPQTANIAENNVIQSIVHLLLEEDKP
TR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaagaagaagcaacaacagcagcagcagcagaaacagaagcagaagtcatct
tcttcatccaaaaacaagccacagtcttccaccggtcctaaactccaaatttcggcggag
aacgaaaaccgtctccggcggcttttactcaactccggccgttcaacggcggatccggta
cacgaagattctaatcttacaaaggcacagaaggcgaagaagctacactccgtttacgag
aagctctcgtgcgaaggcttcactgatgatcatatagaacgtgctctttctcatctcaag
gaaagtgctacttttgaagccgctttagattggctatgtttgattttgccaccaaatgag
ctgccattgaagtttcgcagtagtactgcagctcttccaagtgatggtggctctgtgggc
atcatatcaactgcacgagatgactgggcccctttgccggattcatcagttgctactgaa
catgaaatcgaagaaatatcattcaagagtaaagtgcagcgaaaagttgatacattggat
tctttccaacagtctcaagcagattggatccgtcaatatatggagcaacaggaagaggat
gaatatgaatcatgggaagatgctgcagttgatgaggcatcagaaccaagaagctatgat
attattcgagaagaatatcacagtgctcggttgcaagctattagtgccaaagaaagaaag
gataagaaaggccaagaacaatctggtcaaataattcgtaaacttaaacaagagatggct
gccctaggtatatcagttgatacattagctgccgagtttgagagtcgtcatcgtgccatt
gagaaccaaaacgttgaagctgttacgggtggagaagatggttgcatagagtctacagtc
gagcaggtgggcccgcaagataaagaaacagttacagagagttgctctacgcaggatgtt
ttgctaagtgttcgcagtcaagatggaagtgttgcagatgaggactcaggagatattgag
cttggtgatatgtttctagaagattcatcgtctgatcaagttttgccaccggagattgtg
gagttgcaaaagaaggagaaaatgaaagagttaacaagtgaaaagaacttggaaaagttg
gagggaatttggaagaagggggacccactaaagattcctaaggccattcttcaactactt
tgtcaaagatctggatgggaggcaccgaaatataataaagtacaaggcacaagagatgga
agtagttacactgtcaatgtgatacgtaaagctagcggcaggggtaagaatagaaaagtt
ggaggactaactactgtccaattacctactcctggagaagcatttgaaactgctgaggat
gcacaaaatagagtcgctgcatatgctttgtatcagctcttccctgacctacctgtacac
ttgatgatgacagatccctatgcatcacttgttctacaatggctggaaggggacttatca
ggaaatgtgaaaaacattgaagtagacagacgggccggttttgtggattttttgcttaac
agtgatgcttccgatgctgttgtttctgaggatctgttggatacttctagacaaattgat
tctcaaatatctcatgttcaagaagatacaagtgcacgagatgctggatttgataaaatt
gctgaaagcaccgactatcataaacaggtggagagttcttatcttaaaaagcaacaagag
agtaaaagaaagatgaagaagtatgaggacatgttaaaatctagagccacactccctatt
gctgaattgaaaggcgagattttgcatcggttaaaagacaatgatgtccttgttatttgt
ggagaaacaggatgtggaaaaacaactcaggtgcctcaatttatcttggatgacatgatc
gagcagggacatggtggaatttgtaacatcgtgtgcacgcaaccaaggagaatagcggcg
atttctgttgctgaaagagttgcagatgagcgttgtgaatcttcaccaggttctaaagat
tctttggttggttatcaagtacgtcttgatagtgccagaactgagagaacaaaacttctg
ttttgtacaactggcattctgttgaggatgattgtgggaaacaaaagctttgctgatata
actcatgtcatagttgatgaagtgcacgaacggtctctcttgggtgattttctactaata
attttgaagaattttattgagaagcaatctgcccaacgcacacaacaaaagctgaaagta
atccttatgtctgcaacagtggattcacaacttttttcacattactttggtgactgccct
gttattcatgcacaaggccgaacacatcctgtgacgacccactttcttgaggacattcat
gaaactattgactaccgacttgcttcagattccccagcttctttgagatctgatatacca
aggcaaaagggtgctgctgttgataatcacaggggaaagaaaaatcttgttttatctgca
tggggtgatgaatctgttttatccaaaggctattcaaacccgtattatgttccagaaaac
tatcaaacatacagtgagcaaactcagcaaaatctgaaaaagttgaacgaagatgttatt
gattatgatcttcttgaggacctgatttgtcatgttgatgaaacttaccccgagggtgca
atattggtctttctaccgggagtttctgaaattcacacattgcttgacaagttagccgct
tcttatcaattccgtggggtagcatctggatggcttctaccattgcattcaaatattgca
tcatctgagcagaaaagagtgtttctaagacctcctgatgatatccgtaagattataata
gccacaaacattgcagagactagtattacaatagatgatgtagtctatgtcattgactgc
ggtaagcataaggagaatcgttacaacccacgcaagaaactgtcaagcatggttgaagat
tggatatctcgagcgaatgcaaggcagcggcggggaagagccggtcgtgtaaaacctgga
atttgcttttgcttgtatacacgttacagatttgaaaaactaatgaggccatttcagctt
ccagagatgttgcggatgccattggtggaattgtgtttacagattaaattactttctctt
ggtcgtataatgccattcttgcagaaggcccttgaacctccaacagaagaggccattact
tctgcaatctcattattatacgaggttggtgcggttgaaggtgacgaagaattaacacct
cttgggcatcatttggcaaaactaccagttgatgtattaatcggaaagatgatgttatat
ggtggtatatttggttgcttatcacctatcctatccatctcagcatttctgagctataaa
tcacccttcatatacccgaaagatgagaggcatgctgttgagagagcaaagttggctttg
ttgaccgataagtcaggtggtgcaactgatctggacaatggggagcggcagtctgaccat
ttgattatgatgattgcatacaaaaagtgggagaaaattttacgcgagaatggatctaat
gctgcagaacggttctgcaaatcatattttttaagcagctctgttatgtacatgataagg
gacatgcgtgtgcaatttggaacattgctggcagacattggtcttattgagctccccaaa
aattatcagaatgggggcaaatggaaagagaaactcgacagctggttttcagatacatca
caaacattcaatgtttattcaaatcacttgtcagttgtgaaggcattgctatgtgctggt
ttatatcccaatgtagctgccaccgaacaagggatctcagagaaagctctaaatagcctt
agacaatctgcgggtcctacaaccgatgactcgaatgtgtggtttgatggaagacgggtt
gtacatattcacccttcttccgtcaatagcaactcaaaaacttttcagcatccgtttctt
gttttccttgaaaaggttgagacaacgaaggtgtttcttcgagatacaaccatcacttca
ccctactctattttattgtttggtggttccatgaacattcaacaccagacgggtctcgta
atcatagatgggtggttgaaaatggctgcaccagctcaaacggctgtcctcttcaaggaa
cttagactaactcttcattcaattttgaaggagctaattaggaagccgcagactgctaac
atagccgaaaataacgtcattcagtctatagtacacttactattagaagaagataaacct
acaaggtga
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