Helianthus annuus (common sunflower): 110928858
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Entry
110928858 CDS
T05101
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110928858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
han04040
]
110928858
Ion channels [BR:
han04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110928858
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
110928858
NCBI-ProteinID:
XP_022027594
LinkDB
All DBs
Position
3:complement(26899008..26906979)
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AA seq
737 aa
AA seq
DB search
MFDYASKSQYVGGHREKFARLDDLDSRLSSPASGVAMNKCGFEGITRTNRAPATPSRSFK
NGIKKGSEGLKSIGRSLGFGVSRAVFPEDLKVSENKILDPQDKFLLTWNKYFVVSCILAV
SIDPLFFYLPVFDQTKTCLGIDRKLAITATTLRTVVDVFYLIHMALQFRTAYIAPSSRVF
GRGELVIDPAQIATRYLRWYFIIDFLAVVPLPQIVVWRFLQRSRGSDVLATKQALLIIVL
LQYIPRFARIVPLTSELKRTAGVIAETAWAGAAYYLLLYMLASHIVGAFWYLLSVERNDT
CWQRACKNSHYNTNFLYCGNNYMDGYDKWSNVSSSVLTAACSTDGDNPPFDFGIFEQALS
SGIVSSTKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIALAIFGLILFALLIGN
MQTYLQSLTIRLEEMRIKRRDSEQWMHHRLLPHDLRERVRKYDQYKWLETRGVDEENLVQ
NLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLKPCLYTNNTYIVREGDPVDE
MLFIIRGRLESATTDGGRSGFFNSGFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAL
REVEAFALPADELKFVAGQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIL
EQRRKEEEEAELAAGKNGGGSGGGSSGSSYSLGATFLASRFAANALRGVHRNRNLKSARE
LMKLQKPPEPDFTADAD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactatgcatcaaagtcccaatacgttggtggccacagggagaagtttgcaagg
ttggatgatttggattctagattatcatcaccagcttccggagttgcaatgaacaaatgt
ggattcgagggaataactcgtacgaaccgagcacccgctaccccctctcgatccttcaaa
aacggaattaaaaaagggtcagaaggacttaaatccatcggtagatcactcgggttcggc
gtttctcgggccgtttttcccgaagacctaaaagtctcagaaaacaaaatcttagaccca
caagataaatttctactcacatggaacaaatactttgttgtctcgtgtattctggctgtc
tctattgatccactcttcttctatcttccggtttttgatcaaacgaaaacgtgtcttggt
attgacaggaaattagccataacagctacaacgttaaggactgttgttgatgtgttttat
cttattcatatggctcttcagttccgaactgcttatattgctccatcttctagggttttt
ggacgcggtgaacttgtgattgatcccgcacaaattgctacacgataccttaggtggtat
tttattatcgattttctcgctgtcgtgccactgcctcagattgtcgtttggcgatttctg
cagaggtctagaggatcggatgtattggctacaaaacaagccttgctcattattgtgtta
cttcagtatattccgagatttgcgcgaatcgtccctttgacatcagaacttaaaagaact
gctggtgtaattgcggaaaccgcatgggctggtgctgcttattatttgttgctatacatg
cttgccagtcatatagttggggccttttggtatttgctatcggtagaacgcaatgataca
tgctggcaaagagcttgtaaaaacagccattacaatacaaatttcttgtactgtggaaac
aactacatggatggttacgataagtggagcaacgtcagtagctcagttttaaccgcagct
tgctccacggatggtgataacccaccgtttgattttgggattttcgagcaggctctttca
tcgggcattgtttcatcaactaagtttgtttccaagtactgctactgcctgtggtggggc
ctacagaatttgagcacgcttgggcaggggcttcaaaccagcacgtatcccggagagtct
attttttccatcgcgctagccattttcggtctcattctctttgctctcttgattggcaat
atgcagacgtatcttcaatctcttactatccgacttgaagaaatgagaattaaaaggcgg
gactcagaacagtggatgcatcaccggttacttccacatgatctgagggagcgtgtgaga
aaatatgatcagtacaaatggttggaaacacgtggagttgatgaggaaaatttggttcag
aatctaccaaaggatctcagacgggacataaaacgtcatctttgtcttggtttggtcaaa
agggtccccttatttgagaacatggatgaaaggttactagacgccatctgtgaacgattg
aagccttgtttatacacaaacaacacttacatcgtacgagaaggagatccggtggacgaa
atgcttttcatcatacgaggtcgactcgagagtgcaaccacagacggagggagaagcggg
tttttcaacagcgggtttctaaaagaaggcgacttttgcggagaggagcttctaacgtgg
gccctcgaccctaaatccggttctaacctcccgtcttccactagaaccgtgaaggcgttg
agagaggtggaagcgtttgcattaccagccgatgaactgaagtttgtcgctggtcagttt
aggcgtcttcacagtcggcaggtgcaacacactttccggttttactcgcagcagtggcgg
acttgggcggcgtgcttcatccaggccgcctggcggaggtattccaagaggaagattctt
gagcagcggaggaaggaagaggaggaagcagagttagcagcaggtaagaatggcggcggc
agcggcggcggtagcagtggaagttcatacagccttggagctacctttttggcttcgaga
ttcgccgcgaatgctctccgtggggtccaccggaaccggaatttgaagagtgctcgggaa
ttgatgaaactacagaagcctccggaaccggattttactgctgatgctgattag
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