KEGG   Helianthus annuus (common sunflower): 110928983
Entry
110928983         CDS       T05101                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110928983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110928983
   03036 Chromosome and associated proteins [BR:han03036]
    110928983
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110928983
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110928983
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_VPS8 MIOS_WD40 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_DCAF4 Vitelline_membr
Other DBs
NCBI-GeneID: 110928983
NCBI-ProteinID: XP_022027757
LinkDB
Position
3:77936616..77943035
AA seq 348 aa
MSTFGVASASNTNPNKSTEVVSPPTDAVSSLCFSPKANHLVATSWDNQVRCWEVTKNGTS
VTTVAKTSMAHEQPVLCSSWKDDGTTVFSGGCDKQVKMWPLLSGGQPTTVAMHDGPVTQV
AWIPEMNLLVSGSWDKTLRYWDLRQSNPVHTQQLPDRCYSLSVRHPLLVVATADRNLIAF
NLQNPQAEFKRIVSPLKYQTRCVAAFPDQTGFLVGSIEGRVGVHHIDEQQSKNFTFKCHR
EGNEIYAVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNNDGS
IYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQESEVKAKPRAGAVGRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtcaacattcggcgttgcttctgcctccaatactaatccaaacaagtccactgaggtt
gtgtcgcctcctactgatgctgtatcaagcctttgtttcagtcctaaagcgaatcatctt
gttgcaacttcatgggataaccaggtgaggtgttgggaagtgacaaaaaacggaacttca
gttaccactgtggcaaagacatccatggcccatgagcaaccagttttatgctcatcatgg
aaagatgatggaacaacggtcttctctggaggctgtgataagcaagtgaagatgtggccg
ttattgtctggcggccaaccaacaactgtagcaatgcatgatggccccgtgactcaggtt
gcttggattccagagatgaatcttttggtttcaggaagctgggataaaactcttaggtac
tgggacttgagacaatcgaatccagtccacacacaacaacttccagaccgttgctattca
ctttcagtgagacatcccctactggttgttgccaccgctgatagaaatcttatcgcattc
aacttacaaaaccctcaggcagagtttaagagaattgtgtctcccttgaaataccaaaca
agatgtgttgctgcctttcctgaccagactggtttcttggttggatcaattgaaggaagg
gttggtgtgcatcatattgatgaacaacaaagtaaaaatttcacatttaaatgccacaga
gagggaaatgaaatctatgcagtcaactctcttaacttccatcctgttcatcatacattt
gcaactgcaggatctgacggtgcttttaacttctgggacaaggatagcaagcaaagatta
aaggcaatgtcaaggtgcaatcaacctataccttgcagtagctttaacaatgacggatct
atatatgcttacgcggtgtgttatgactggagcaagggtgctgaaaatcataatccatcc
acagcaaaaacctcaatttacttgcacttgccccaggagtccgaggttaaagccaagcca
cgtgctggggcggttggaaggaaatga

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