Helianthus annuus (common sunflower): 110929339
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Entry
110929339 CDS
T05101
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110929339
03015 mRNA surveillance pathway
110929339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110929339
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110929339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
110929339
NCBI-ProteinID:
XP_022028171
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All DBs
Position
3:complement(59229049..59234806)
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AA seq
423 aa
AA seq
DB search
MAKPGRGRPAAPSRSGSASSSSSRSRSRSVSGSSGSSRSRSRSRSYSSSSSPSRSRSPPA
KKSSGDGLRRGRSPQAQSKRSSPPPRKASPVPESLVLHIGQLTRNVNENHLKEIFGTFGE
VVHVRLAMDHIVNLPKGSGYVEFKLRADAEKAQLHMDGAQIDGKVVQAKFTLPERKKASP
PPKPLTTGSRRDLPKNDNAGVDAEKDGPKRGPAAASPRRRPPSPPRRRSPPPRRGSPPRR
RIDSPPRRPESPYRRGGSPPPPRRRPASPPPPRRRPASPPARGRSPSPPARRYNRSPLRA
SPRRPRASPIRRRSPPPRRRSPPPRRSSLSRRRSRSPIRRRARSRSRSKSVSPRRGRPPV
GRRGRSSSYSSSPSPRKVARKVSRSRSPKRPIRRRSSSNSSSSSGGSLPPPPPPPPGPPP
RRP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaggccgcggccgtcccgccgcaccctctcgctccggctccgcctcctcc
tcctcctctcgctctcgatctcgctccgtctccggctcctctggctcctcccgttccaga
tctcgctctagatcctactcgtcgtcttcgtctccgtctcgcagccgcagtcctccggcg
aagaagagttctggtgatggactgaggcgaggtcggtctccgcaagcgcagtctaagagg
agttctccacctccaagaaaagcttctcctgtacctgagtcacttgttcttcacattggc
cagctcacaaggaacgtaaatgaaaatcatttgaaagaaatttttggaacttttggtgaa
gttgtgcatgtacggctggctatggatcacattgttaaccttccaaaaggatctggatat
gttgagttcaagttaagagccgatgctgaaaaagctcaattacacatggatggtgctcaa
attgatgggaaggttgttcaagccaagtttactttacctgagagaaagaaagcctcacca
cctcccaagcctttgaccaccggttcaaggagagatttgcccaaaaatgataatgctggc
gtggatgctgaaaaagatggacccaaacgtggccctgctgctgcatctcctcgccgtaga
cctccatcaccaccacgacggaggtctcctcctcccagaagaggatctcctccccgtcgc
cgtatcgactcccctcctcgacggccagaatctccttaccgccgtggcggctcaccgcca
cctcctagaagaaggcctgcatcaccaccgcctccaagaaggcggcctgcatcaccaccg
gctagaggccgctcaccttctccgccagcaagacgttataatcgatcacctcttagggca
tctcctcgtcggccgcgtgctagtcccattcgaaggcggtcacccccaccaagacgccgg
agtccacctcccagaaggtcatctctgagtcgtaggcggagccgctcgcctatcagaagg
cgtgcacgttcacgttctcgttctaaatcagtttcaccaaggcggggccggccgccagtt
ggcaggcgcgggaggtcgtcatcttactcgagttccccaagcccacgaaaggtggcaaga
aaagtatcaagaagtcgcagtcctaaaaggcctataagacgtagaagcagcagtaacagt
agcagcagcagcggcggttcacttcccccaccaccaccaccgccaccaggaccaccacct
cgtaggccttga
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