Helianthus annuus (common sunflower): 110929590
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Entry
110929590 CDS
T05101
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110929590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110929590
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110929590
Hops complex
110929590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
OCRL_clath_bd
zf-RING_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110929590
NCBI-ProteinID:
XP_022028438
LinkDB
All DBs
Position
3:complement(121082561..121092355)
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AA seq
936 aa
AA seq
DB search
MYQWRKFEFFEEKYAGKGLVPEEVTGRIECCSSGRGKIAVGCEDGTVSLLDRGFKFSYGF
QAHTSSVLFLQQLKQRNFLLTVGEDEQISPQLSSVCLKVFDLDKTQPEGPSTSIPDCIQI
LRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIQGDIARERIKRFMLQVENRQ
DKTQCSITGMGFRVDGKAFQLFAVTPTSVSLFNLQTQPASRQTLDQIGSNANSVAMNDRL
ELIIGRPEAVYFYTVDGRGPCWAFEGDKKFLGWFRGYLLCVIADQRNGSNTFNIYDLKNR
LIAHSIVVKEVSHMLCEWGSILLIMKDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQS
QQADAAATAEVLRKYGDHLYSKQDFDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LENLHEKGLGSKDHTTLLLNCYTKLKDVDKLNVFIKSEDGVGEHKFDVETAIRVCRAANY
HEHAMYVAKKSGRHEWYLKILLEDLGNYDEALQYISSLDQGQAGVTVKEYGKLLIEHKPT
ETIEILMKLCTEEGTYAYMLPSPVDFLNIFIHHPRSLMIFLEKYINKVKDSPAQVEIHNT
LLELYLSTDLSFPLMSQSQATINENGNGTSNGKLPQEHKDEKTENDHKQRLEKGLELLKR
AWPSDQEQPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYMRAHDHVGLIACCK
RLGDSGTGGDPTLWADLLKYFGELGEDCSKEVREVLTYIERDDILPPIMVLQTLSSNPFL
SLSVIKDYISRKLEHESKLIEEDRRMIDKYQEETSTMRKEIQDLRTNARIFQLSKCTACT
FTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLEMKRNLEQNSKNQDQFFNQVK
SSKDGFSVIAEFFGKGIISKTSKGPSGSPDSTTAGF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggaggaaattcgagttcttcgaggagaaatacgccggaaaaggtctggta
ccggaagaagtcaccggacgaatcgagtgttgttcgagcggacgggggaaaatcgcggtc
ggatgcgaagacgggaccgttagtttactggatcgagggtttaagttcagttatggattc
caagctcacacttcctctgttctgtttcttcaacagcttaagcaaagaaacttcctacta
actgtcggagaagatgaacaaatatctccacagttatcatctgtgtgcctcaaggttttc
gaccttgataaaactcaacccgagggtccaagcacatcaattcccgattgtatccagata
ttacgaatattcaccaaccagttcccagaagcaaagattacatcatttctagttctagaa
gaagctccaccaatattactaatagctattggactagacaatggctgcatttattgcatt
caaggggatattgcacgtgaacgcatcaaacggttcatgcttcaagtggaaaaccgtcaa
gataaaactcaatgttctataactggaatgggttttcgtgttgatgggaaagcatttcag
ttatttgcagttactccaacttctgtaagcttgtttaacttgcaaactcaacccgctagc
cggcaaaccctcgatcaaataggatctaatgctaacagtgttgcaatgaatgaccgtctg
gagcttatcattggtcgacctgaggctgtttatttctacacagttgacggtagaggtcca
tgttgggctttcgaaggagataagaagtttctcggttggtttcgtggatatttattatgc
gttatcgcagaccaacgaaatggcagcaacaccttcaatatctacgatttgaaaaaccgc
ttaatcgcacattcaatcgtggtcaaagaagtttcccacatgttatgcgaatggggaagc
atactgcttataatgaaggataaatctgctctgtgtattggcgagaaagatatggaaagc
aagttagatatgctttttaaaaagaatctttatacggtagcgataaatctcgttcaaagt
caacaagctgacgcagctgcaaccgctgaagttttacgaaagtacggtgatcatttatac
agcaaacaggattttgatgaggctatggctcagtacattcacacgattggtcatctagaa
ccttcatatgtgatccagaagtttctagatgcacagaggatctacaatcttactaactac
ttggagaatttacacgagaaaggtcttgggtcaaaagaccacactacccttctcttaaac
tgttatacgaagctgaaagatgtagacaagttgaacgttttcatcaaaagcgaggatggc
gtcggggagcataaattcgatgtggaaaccgcaattagggtttgtcgagctgcgaattat
cacgagcatgcgatgtatgtcgctaaaaaatctgggagacatgagtggtatttaaagatt
ttgcttgaagatttgggaaattacgacgaggcgttgcagtatatatctagccttgaccaa
ggtcaagccggtgtgacggtcaaagagtacggtaaattgttaatcgagcataagcccacc
gaaacaatcgaaattttaatgaaactttgcaccgaggaaggtacatatgcgtatatgtta
ccgtctcctgttgattttctcaatattttcattcatcatccacgatcacttatgattttt
ctcgaaaagtatataaataaagtcaaagactcaccggctcaagtggaaattcataacaca
ttgttagagctatatttatccaccgacttgagcttcccgttaatgtctcaatcacaagct
actattaacgagaatggtaatggtacttcgaatgggaaattacctcaagaacataaagat
gaaaaaaccgagaacgatcataaacaacgactcgaaaaagggcttgagttgctgaaacgt
gcatggccgtcggatcaagaacaaccgttgtatgacgttgatctggctataatcttatgt
gagatgaacgccttcaaagaagggctcttatatctgtacgaaaagttgaagctttataaa
gaagtgatcgcttgttacatgcgtgcacatgatcatgttgggttgattgcttgttgtaag
agattaggggactcggggaccggaggtgaccccacactctgggccgatttgttgaagtat
ttcggtgaactcggggaagattgctctaaggaagtgcgggaagttttgacttatatagag
cgagatgatattttgcctccgattatggtgttacagacgctttcgtcaaatccgttttta
agcctctctgttattaaagattatatatctagaaaactggaacatgagtcaaaacttatc
gaagaggatcgtcggatgattgataagtaccaggaagaaacatcgacaatgagaaaagaa
atccaggatttgaggacaaacgccagaatctttcaactaagcaagtgtactgcttgcact
ttcacgctcgacctgccagctgtccactttatgtgtatgcattcgttccatcaacgttgt
cttggtgacaatgaaaaagaatgtcccgaatgtgcccctgagtacagatccgttctagaa
atgaaaagaaacttggaacaaaactccaagaatcaagatcagttctttaatcaagtcaag
agttcaaaagatggattttcggtaattgctgaattttttggaaaggggattattagcaaa
actagtaaaggaccctctggatcaccagattcaaccaccgctggtttctga
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