Helianthus annuus (common sunflower): 110929971
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Entry
110929971 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110929971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110929971
03036 Chromosome and associated proteins [BR:
han03036
]
110929971
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110929971
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110929971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110929971
NCBI-ProteinID:
XP_022028861
LinkDB
All DBs
Position
2:10665379..10674516
Genome browser
AA seq
1002 aa
AA seq
DB search
MAVYLDSSDSYHNHLVSQFKKRKVISDGDNGSLVCSLTCLPTLQASDYFMEPSLSQLITR
ELTDPGYCARVQNFTVGRYGYGNVRFFGETDVRWLDLDQIVKFRRHEIVVYEDETVKPSV
GKGLNKAAEVTLILQKDSSIEKLKLSAENQGAEFISFDTIRKEWKFSVQHFSRFGLSDDE
EDDVMMDDADVDVREREQVTMNDNDGSDLDEGSPLTDSRLLSHSLPSHLGLDPVRMKEMR
MMMFSPEEEEDDAELDNLNGTFSHHRPLHGSKTVQRSSPLTIRKTPLALLEYNPGSFASS
DNGSILLSQQNKGVPLTITKVQGFKLEIKETPVTKSYSKNIVDAGLLMGRSFGIAWGPNN
LLIHCGSVGDSNKSPHLSSTISLEKVATDNVVRDENNKIREELIGLCFDSPLSYHKEINF
ETNEFIVDSYKLKARKLVFNRLDLSHVCRQYIGIIEKQLEVPGLSSSARVMLMHQVFVWE
LINVLFSSKESSIEADVAALPLIRRAEFSVLLQESVCHRVQDEISSLNDSKDLQQLFLLL
TGRQIDAAVELSASRGDVRLACLLTQAGGSTVNRMDIDRQLDLWKTNSLDFGFIENDRIR
LFELLAGNIHGALGEMDIDWKRFLGLLMWYHLQPASDLTSIFQTYQHLLEDGRAPYPVPV
YIDEKLVMDKISWSPGNRFDLAYYLMILHSNEGRDVTNIHMLKTMFSAFASTHDPLDHHM
IWHQRAVLEAVGTFSCDDLHVLDMGFVSQLLNLGHCHWALYVVLHMSHRDDYPYLQASVI
REILFQYCETWSAQENQRQFIVDLGVPSAWLHEALAVYHAYNGNSFKALEHYLGCGFWQK
AHSTFITSVAHSLFMSGKQSEILRLATSMEDHKSEIENWDLGAGIFITFYSLKSSLKEDD
SMTELVSLQDKNDACRKFFSRLKGSLAFWEGRLPIDARTVYAKMAEQISDLLVADPGEGS
TTEVKLDCFNTIFDSPVPQDLLSSHLQSAISHFTLHLTEAAS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatttagactcctcagactcgtatcataatcatcttgtatctcagtttaag
aaaagaaaagtaatttcggacggtgataatggctcgttagtgtgttcactcacgtgttta
cctactcttcaagcttctgattatttcatggaacctagtttgagtcagttgatcacgagg
gaactcacagatccaggttactgtgctagggttcaaaactttacggttggtaggtacgga
tacggaaacgttaggttttttggggaaaccgatgtcagatggttagatttagaccagatt
gttaagttcagaaggcacgagattgttgtttatgaagatgaaaccgtcaaaccgtcggtt
ggtaaggggcttaacaaagctgccgaagtaactttaatacttcaaaaagattcctcaatt
gagaagttgaaattaagtgcagaaaatcaaggagctgagttcatttcttttgacacaatc
cgaaaagaatggaagttttctgttcaacattttagcagatttgggttgagtgatgatgag
gaggatgatgtcatgatggatgatgctgatgtcgatgttagagaacgagaacaggttaca
atgaacgataacgacggttctgatcttgatgaaggcagcccgttaacagattctcgttta
ctttctcattcgcttccttcgcacctcgggctcgatcctgttagaatgaaggagatgagg
atgatgatgttttctcctgaagaagaagaggatgacgccgaattagataacttaaacggc
acgttttcacaccatagaccgttacacggtagcaaaacggtgcaaagatccagcccgtta
acaattcggaagaccccactagctttactcgagtacaatcctggtagttttgcttcaagc
gataatgggtctattttactctctcaacaaaacaaaggggttcctttgacaataacaaaa
gttcaagggtttaaactggaaattaaggaaacaccagtaacaaaaagctattcgaagaac
atagttgatgctggattgttgatgggtaggtcgttcggtatagcatggggtccaaacaac
cttcttattcactgtggttccgttggtgacagtaataagagtccacatctttcttctaca
ataagtttagaaaaagttgcaaccgataatgtcgtcagagatgaaaacaacaaaatacgt
gaagaacttattggtttatgcttcgattctccgttaagttaccataaagaaattaatttt
gaaacgaatgaattcatagttgattcatataagttaaaggctcgaaagcttgtgtttaac
cgtttggatttatcgcatgtatgccgccaatatattgggattatcgaaaagcagttagaa
gtaccaggattatcttcttctgctcgtgtgatgttaatgcaccaagtttttgtttgggaa
cttataaatgttcttttttcctcaaaagaaagttctatagaagctgacgtggcagcactc
ccgttgattcgaagagcagagttcagtgttttgttacaagaaagtgtttgtcaccgtgta
caagacgaaataagttcgttaaacgattcaaaagatttacaacagttgtttttactttta
actggccggcaaatcgatgcagccgttgaattgtcggcatctaggggagatgtacgactc
gcttgtctgttaacccaagctggtgggtccaccgttaaccgtatggacattgatcgacaa
ctcgacctttggaaaaccaacagtctagatttcggttttattgagaatgacaggataagg
cttttcgagttgcttgcaggtaatatccacggggcattaggtgaaatggatatcgactgg
aaacggtttttaggattgctgatgtggtatcatcttcaacctgcttccgatttgacttct
atatttcaaacctatcaacaccttctagaagatgggcgggccccgtatccggttcctgtc
tacatagatgaaaaactggtaatggataaaataagttggagtcctggtaaccgtttcgat
cttgcgtattatttaatgattcttcatagtaacgaagggagagacgttactaatattcac
atgttgaagactatgtttagtgcgtttgcttcaactcacgatccgcttgatcatcatatg
atatggcatcagcgtgcagtgttggaagcggttggaacgtttagttgtgatgatcttcat
gttcttgatatgggatttgtttcacagttgttaaacctaggacactgtcattgggctctc
tatgttgtgctccacatgtcacatcgtgatgattatccgtatctgcaagctagtgtcatt
cgggaaatcttgtttcagtattgtgaaacatggagtgctcaagaaaaccaacgacagttt
attgtggatttgggagttccttcggcttggttgcatgaggccttggcagtatatcatgct
tataatggaaattctttcaaggctcttgaacactatcttggatgtggtttttggcaaaaa
gcacattcaaccttcataacttccgttgcacattctcttttcatgtcaggcaaacaatca
gagatattgaggctggcaacctctatggaagaccataaatccgagatcgaaaactgggac
ttgggagctggaatttttataactttttattcacttaaaagttctttgaaggaagatgat
tcgatgactgaactggtgtctctccaggacaagaatgacgcatgcagaaagttttttagt
cgtttgaaaggatctttggcattttgggaaggccgcttgcctattgatgccagaacggtg
tacgcaaaaatggcggagcaaataagtgatctgcttgtagctgatcccggggagggttca
accactgaggtcaagttagattgctttaacacgatatttgattcaccggttcctcaagat
cttctttcatcccatttacagtccgcaatatcacattttacattgcatcttactgaagca
gcctcataa
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