Helianthus annuus (common sunflower): 110930232
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Entry
110930232 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110930232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110930232
03036 Chromosome and associated proteins [BR:
han03036
]
110930232
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110930232
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110930232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Cornifin
Motif
Other DBs
NCBI-GeneID:
110930232
NCBI-ProteinID:
XP_022029190
LinkDB
All DBs
Position
3:157795836..157802324
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AA seq
993 aa
AA seq
DB search
MTASMNQSFGQSSNNPFGSSSVFGQNNNPNNDLFVAKPSVSSSPFGSQTGSSIFGGTSTS
VFGTQASSPVFDASSTPAFTSSMPAFGASSSPFFGVSSSSFDSSSVFGQMPASSRFRSTT
QSSYTESSFQKPKPATSSSFSFGSSPAFGQSTSAFGSNPFGATSTTVGVQSSPSGCRCRF
CQPCFGGQQRGGTRVTPYAQTPEADTSSGTQPAGKLESISAMPTYKEKCHEELRWEDYQL
GDKGGPDPAAQSISGTGFNMNNTQQSNPFASASPAFGQSSANTFSFTTSTTPIAPKTSTG
FWSSTPSHGFASTQSSPLYQSTTPTLAQTSSLFGSTSAPAFGSTSTPASGATSRPAFGST
STPAFGSTSTPAFSSTSTPAFGATSTPAFGSTSTPAFGSTSTPAFGSTSTPAFGSTSTPA
FGSTSTPAFGSISTPAFGSTSTPASGSTSTPAFGSTSTPAFGSTSTPAFGSTSTPAFGST
STPASGSTSTPAFGSTSTPAFGSTSTPAFGSTSTPAFGSTSTPAFGSSPPAFGASSTPDI
VASSTPAFGASSTSPFGVSSTSPFGASSTPAFGASSTSPFGVSSTSPFGASSTPAFGASS
TSPFGASSTPEFGASSTSPFGASSTSPFGSSPASAFYATCSSFNFSSNPAFCQSTSIFER
SSPSGATSTAFGAQSSSFGGQTTTPTCCSPRFGQPCFGGQQNRGTRVIPYADTPDSDSYA
GKLKSISAMHAYKEKSHGELRWEDYQRGDKGGLDPAARSSGGKSFNPFAPMPSSISSTNP
FGPMTSTFRSTPSLGSSPFGPAACNPFKSTPSPAPSAIGSTSSFGPTPMIITTPTLVQPS
FSFSPFWSTQPPLPFWSTGGTSSNFGRVVDKRAPMKISCALTSRHLSKTCPKNVSPKFSF
ISNEEKTTSTTPAFGQPSFEVPQRGRTRVIPYGPTTVTEYEYGSEFAGNMESISAMLAYK
EQSHEELRWADYQVGDEGGPILMLNLFVEWSLK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttctatgaaccaatcgtttgggcagtcatctaataatccatttgggtcttca
tcagtttttgggcagaacaataatccaaacaacgatctgtttgttgcaaaaccatctgtt
agtagttctccctttggttcacaaacagggagttcaatttttggcggcacgtctaccagt
gtgtttggtacgcaagcttcatcaccagtttttgacgcctcgtcaactcctgcttttacg
agttcaatgcctgcttttggagcttcatccagcccattctttggtgtttcatcctcttct
tttgatagttcatctgtgtttgggcagatgcctgcatctagtcgctttcgatccacgaca
cagtcaagttatactgaaagctcatttcagaaaccaaaacctgctacaagctcttctttc
agttttgggtcaagtccagcatttggtcaatcaacttctgcttttggaagcaatccgttt
ggtgccactagcacaaccgttggcgttcaaagctccccatctggatgtaggtgtcggttt
tgtcaaccatgttttggaggtcaacagcgtgggggaactagagtaactccttatgctcaa
acacctgaggccgatacgagtagtggaactcagcctgctggaaaactggagtcaatatca
gcgatgcctacatacaaagaaaaatgtcacgaagaacttagatgggaggattatcaattg
ggagataaaggggggccggatcctgctgctcaatctattagtggaacaggttttaacatg
aacaatacacaacaatcaaacccttttgcttctgcttcacctgcatttgggcagtcatct
gcaaatacgttttctttcactacgtctaccactccaattgccccaaagacttcaacgggg
ttttggagctcaactccgtcacatggctttgcaagcactcaatcatcccctttgtaccag
tcaaccacacctactcttgcgcagactagttctctatttggttcaacaagcgcccccgct
tttggttcaacaagcacacctgcatctggtgctacaagcaggccagcttttggttcaaca
agcacacctgcatttggttctacaagcacccctgcttttagttcaacaagcacacctgca
tttggtgctacaagcacgcctgcttttggttcaacaagcacgcctgcatttggttcaaca
agcacgcctgcttttggttcaacaagcacgcctgcttttggttcaacaagcacaccagct
tttggttcaacaagcacgcctgcatttggttcaataagcacgcctgcatttggttcaaca
agcacgccagcttctggttcaacaagcacgcctgcatttggttcaacaagcacgcctgct
tttggttcaacaagcacgcctgcatttggttcaacaagcacgcctgcttttggttcaaca
agcacgccagcttctggttcaacaagcacgcctgcatttggttcaacaagcacgcctgct
tttggttcaacaagcacgcctgcatttggttcaacaagcacgcctgcttttggttcaaca
agcacgcctgcttttggttcaagccctccagcttttggtgcttctagcactccagatatt
gttgcatcaagcacaccggcgtttggtgcttcaagcacttcgccgtttggtgtttcaagc
acttcgccttttggtgcttcaagcacaccggcgtttggtgcttcaagcacttcgccgttt
ggtgtttcaagcacttcgccttttggtgcttcaagcacaccggcgtttggtgcttcaagt
acttcgccgtttggtgcttcaagcactccggagtttggtgcttcaagtacttcgccgttt
ggtgcttcaagcacttcaccgtttgggtcttcacccgcttctgctttttatgctacttgc
tcttctttcaatttttcgtcaaatccagcattttgtcaatcaacttctatatttgaaaga
agcagcccatccggtgctactagcacagccttcggggcgcaaagctcctcatttggagga
cagaccacaacaccaacatgttgcagtcctaggtttggtcaaccatgttttggaggtcaa
cagaacaggggaactagagtaattccttatgctgacacacctgacagtgatagttatgct
ggaaaactaaagtcaatatcagcaatgcatgcatacaaagaaaaaagtcacggagaactt
agatgggaggattatcaacgtggagataaagggggcttggatcctgctgcccggtcgtct
ggtggaaagagctttaacccgtttgcacctatgccttcttccatttcatctaccaaccca
tttggcccgatgacttcaacctttcgctcaactccttcacttggttcttcgccttttggt
cctgcagcatgtaatccctttaagtcaacaccatcaccagcaccatctgcaattgggtca
acttcatcttttggacctacacctatgatcataaccacacctactcttgtgcaaccaagt
ttctctttttcgcccttttggtcaacacaaccaccattacccttttggtcaacaggtggc
acatcaagcaattttggccgcgtcgttgacaaacgagctcctatgaagatatcatgtgcg
ttgacttctcgacatctttctaaaacatgccccaaaaatgtaagtccaaagttttcattt
atcagtaacgaggaaaagactactagcacaacaccagcgtttggtcaaccatcttttgaa
gttccacaacgtgggcgtactagagtaattccttatggtccgacaactgtgaccgagtat
gaatatgggtcagaatttgctggaaatatggagtcaatatccgcaatgcttgcatataaa
gaacaaagtcacgaagaacttagatgggcggactatcaagtaggagatgaaggggggcca
atcctaatgctcaatcttttcgtggaatggtctttaaaatga
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