Helianthus annuus (common sunflower): 110930348
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Entry
110930348 CDS
T05101
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110930348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110930348
03036 Chromosome and associated proteins [BR:
han03036
]
110930348
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110930348
Coactivators
SAGA/TFTC/STAGA complex
110930348
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110930348
STAGA complex
110930348
TFTC complex
110930348
SAGA complex
110930348
SLIK complex
110930348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_Aladin
DSE1_N
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_WDR41
ASA1
Beta-prop_EIPR1
PAC11
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_IFT140_2nd
LisH_SSDP
LisH
LisH_PAC1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
110930348
NCBI-ProteinID:
XP_035843518
LinkDB
All DBs
Position
3:155258203..155272653
Genome browser
AA seq
669 aa
AA seq
DB search
MEEELDKAVFLYLKKKGFTQTEQIFQQEQQNKNNKNATDASMSDTDLAKQILTLSQSENI
PAMYHDGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLIAKGHLQEARAFFSSFRED
HEMMHSRDLKKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQYLHKTQSITML
GIINEHIDFQVSPGQPNSISDDAEAFSIVGSGQDAANLINQKEIHWGLLEDSLEDRLEKA
GGLLSDSEKTEGDAKEGELDESKKKTAEGGKQGGPLKKLKKDKVGGAAGKGARGEGDKAA
AAPRVKPELTLPPIPTDVENSILEDLRNRVQLSNSTLPSVCFYTFVNTHNGLNCSSISHD
GSLVAGGFSDSSLKVWDVAKLGRMGSSVTLGENDSGLNENTLGSNGGKRAYTLYQGHSGP
VYSASFSPWGDFLLSSSSDSTIRLWSTKFNANIVCYKGHNYPVWDVQFSPYGHYFASASH
DRTARVWSMDRVQPLRILAGHLSDVDCVQWHVNCNYLATGSSDKTIRMWDVSSGNCMRIF
IGHRSSVLCLAMSPDGRYLASGDEDGTIMMWDVSNGRCITPLVGHTSCVWSLAFSCEGSL
LASGSADSTVKLWDVNTSVKPPRSEESKNGNTNRLRSLKTLPTKSTPVYSLRFSRRNLLF
AAGALSTNL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagttagataaagccgtatttctgtatttgaagaaaaagggatttacacaa
actgagcagatttttcaacaagaacagcagaacaagaacaacaagaatgctaccgatgct
tccatgtcagacaccgatcttgctaaacaaatcctcacattgtctcagtccgaaaatatc
cctgcaatgtaccatgatggatacagcaagctgagatcttggacttatagctcgctagat
ctgtacaagcatgagttgcttcgtgttctgtatcccgtatttatccattgtttcatggat
ctcatagcaaaaggtcatcttcaagaagcacgagcatttttcagtagcttccgtgaggat
catgagatgatgcattcacgtgatctcaaaaaactagaaggtgtcctttctccgtcgcat
ttggaggagatggagtttgctcattctctaaggcagagcaaagtgaatataaagatatgc
cagtattcttatgagcttcttctgcaatatctacacaagacacaatcgattacaatgctt
ggtattatcaatgaacatattgatttccaagtatctcctggacagcctaactcgatttct
gatgatgctgaagccttttcaattgttggaagtggtcaagatgctgctaacctaataaat
cagaaagaaatacactgggggttgcttgaagattcattagaagatcggcttgagaaggca
gggggtttgctctcagattcagagaagacagaaggagatgctaaagaaggggagttggat
gagagtaagaaaaaaacagcagagggtggaaagcaaggcgggcccctcaagaagttaaag
aaggacaaggttggtggtgcagcaggaaaaggtgctagaggggagggcgacaaagcagct
gctgctccccgtgttaaaccggagcttacgttgccaccaataccaacagacgttgaaaat
tccatacttgaagaccttcgtaaccgtgtacaattgagcaattcaacacttccatcagtt
tgtttctacacattcgttaacacccataatggactaaattgttcatcaatatcccatgat
ggatcgttggttgccggtggattctctgattcatcactcaaggtctgggatgttgcgaaa
cttgggcgtatgggcagttctgttactctgggtgaaaatgattcgggtctgaatgaaaac
acacttggatcaaatggtggaaaaagagcgtacactttgtatcagggtcattctggaccc
gtttattcagcttcatttagtccttggggggattttcttctatcatcttcatcagattca
acaatacgattgtggagcacgaaattcaatgcaaacattgtctgctacaagggtcacaat
taccctgtgtgggatgttcagtttagtccatatggacattattttgcgagtgcatctcat
gacagaacagcaagggtttggtcgatggatagagtacaacctttaaggatactggcagga
catttatctgatgttgattgtgtacaatggcacgtgaactgcaattacctagcgacggga
tccagcgacaaaacaattcgcatgtgggacgtttcgtctggaaattgcatgaggattttc
attggtcataggagttcagtcttatgtttggcaatgtcaccggacggtagatacttagcg
tctggcgatgaagacggtactataatgatgtgggatgtttctaacggtcgttgtatcact
cctcttgtgggccatacgtcctgtgtttggtcccttgctttcagctgtgagggatcgctt
cttgcatctggttcggctgattcaactgtcaaattgtgggacgttaacacaagtgtaaaa
ccgccaagatctgaagaaagtaaaaatggaaatacaaacaggctcagatcgctgaagact
ctgcccaccaaatctactccagtttattctctaaggttttcgcgaaggaatcttctattt
gctgctggggctctttcaacaaatctgtaa
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