KEGG   Helianthus annuus (common sunflower): 110930371
Entry
110930371         CDS       T05101                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110930371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110930371
   04131 Membrane trafficking [BR:han04131]
    110930371
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110930371
Membrane trafficking [BR:han04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    110930371
SSDB
Motif
Pfam: Beta-prop_THOC3 ANAPC4_WD40 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_Aladin Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 110930371
NCBI-ProteinID: XP_022029365
LinkDB
Position
3:complement(161495039..161499058)
AA seq 325 aa
MERSVATLDKGTICSSWNYCGQRLATGLIDGTVTIFDTNDPASSFFTSTFKFKVNGGSVV
KVVWVPPEYGDAIACICSNGSLSIWEEVAQDSEHVQWKQCTSFGGPLDQVLDSQFGDSLS
SLKLTIAYSNGLLKVYEILDSMELDNWQLQAEFQNVTDSVTKFGNASCSSASISWNPQRS
ETRPASFVVGFNSDTPQLNSPKVWEFDHDHQRWLPVAELAEPDDNGYRVCALAWAPNIGR
PYELTAVATSNGLSIWKMASNPDHNGRLSVEKVVTFPCHDNEVWQMEWDMSGMTLATSAT
DGRVRLWQSNLNGIWHEQAVIEPAT
NT seq 978 nt   +upstreamnt  +downstreamnt
atggagagatcagtggcaacgttagataaaggcaccatctgttcttcatggaactactgt
ggccaaagattagccactggtttgattgacggaacagtaacaatcttcgacaccaatgat
ccagcttcttccttcttcacctccaccttcaaattcaaggttaatggtgggagtgttgta
aaagttgtgtgggttcctccagagtatggcgatgcaatagcatgcatatgttccaatgga
agtttgtcaatttgggaagaggtagcacaagatagtgagcatgttcagtggaagcaatgc
actagctttgggggacctttggatcaagttctagatagtcaatttggggactctctttcc
agtttgaaattgacaattgcttattcaaatggccttctaaaagtctatgaaatcttagat
tcaatggaactggacaactggcaacttcaggctgaatttcagaatgttacggattcagta
actaaatttggaaatgcttcatgttcatccgcttctatttcttggaacccgcaaagaagt
gaaacccgccctgcaagttttgtggtgggtttcaactctgatactccacaattaaattct
cccaaggtatgggaatttgatcatgatcatcagagatggcttccagttgcagagctagca
gagcccgatgataacggttatcgtgtatgtgctctcgcatgggctccaaacatcggaagg
ccatatgagttgacagccgttgcaacgtccaatggattatcaatatggaaaatggcatca
aaccctgaccataatggaaggctttcagttgagaaagttgtcacgtttccttgccatgac
aatgaggtgtggcagatggagtgggatatgagcggaatgacactggcaacttcagcgact
gacggaagggtgagattgtggcagtcaaaccttaacggaatttggcatgaacaagcggta
attgaacctgccacataa

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