Helianthus annuus (common sunflower): 110930401
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Entry
110930401 CDS
T05101
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110930401
03009 Ribosome biogenesis [BR:
han03009
]
110930401
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110930401
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110930401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF_NOP9
CPL
PUF
DUF7473
PyrI
Motif
Other DBs
NCBI-GeneID:
110930401
NCBI-ProteinID:
XP_035843519
LinkDB
All DBs
Position
3:155619442..155627271
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AA seq
633 aa
AA seq
DB search
MALKNQKDSQSNKRKTVTGATKGGDKKKLKTSSSNDQQNKPFKKKFDSGKPKFDKPDASN
NVPKTKRELRIQAKELAEARKKKRKPHYTLEQELASLWEKMRRRNIAKEDRSKLVSEALT
KMKGKIPEIAGSHVSCRVLQTCAKYCTPDERNAVYEELKPHFLTLACNTYAVHLITKLLD
NATKEQLASFISSLRGHVASLLRHMVGSVVVEHAYQLGNASQKQSLLMELYSTELQLFKD
LALVKEKRLVDIISKLNLQKSAVVRHMSAVVQPIMEKGIVDHSILHKVLVEYFTIADKSS
AAEVIQHLSSALLVRMIHTKDGSKIGILCIKHGSAQERKKIIKGMKGHVSKIALDRFGSM
VLTCILSVVDDTQLVKKIIIRELQPVLKELIFDKNARRPLLQLLHPNCSRYLSPDDLSLL
DSSIPSLLTKGGSEPESETKSSEAKDDDVDMSDAEENVKSVAGGKKDPTLRRKELLVDSG
LAESLIDACCESSEELLKSNHGKEVLFEVATGGADKLLHPHLDEKLDSLHESIASEVSAP
KSEGQEHLLENFHSSRTIRKLILDCPSFASTLWENTFKGNCKTWAQGHSAKVVSAYMETS
DPKVLKLAKKELKPLLDQGLLKLPDKSQPKKEE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaagaaccaaaaggacagccaatcaaacaagagaaagacagttacaggcgca
accaaaggcggcgataagaagaaactcaaaacctcatcatcaaacgaccaacaaaacaag
ccttttaagaaaaagttcgactccggtaaacccaaattcgataaaccagatgcatccaat
aatgtgcccaaaacgaagcgtgaacttcgtatacaagccaaggaacttgctgaagctagg
aagaaaaagaggaagccgcattacacgcttgagcaagagcttgcttcactatgggaaaag
atgagacgccgtaatattgctaaggaagataggtccaagttggtgagtgaggctttaacg
aagatgaagggtaaaattcccgaaattgcaggctctcatgtttcttgtcgtgtactacag
acatgcgctaaatattgtacgccagatgaaaggaatgctgtttatgaggagcttaagcca
cactttcttacccttgcttgcaacacttatgcagtgcatctcattacaaagctgttggat
aatgccacaaaggaacaactggcaagttttatttcttcgcttcgtgggcatgttgcttct
cttttacgacatatggttggttcagttgttgttgaacatgcttatcaactgggaaatgcc
tctcaaaaacaatctcttcttatggaattatactctaccgagcttcagttattcaaggat
ctagctttagtgaaagaaaagaggttagtggatataatttcgaagctgaatttgcaaaaa
tcagcagtagtgagacatatgtctgctgtggttcaaccaattatggagaaagggatagtg
gatcactctattttacacaaggtgcttgtggagtacttcacgattgccgacaagtcttct
gctgcagaagttattcaacatttgtcaagcgcacttcttgtgcggatgattcacacaaaa
gatggatccaagattgggattctttgcatcaagcatggcagtgcacaggaacgaaagaaa
attataaaaggaatgaagggtcatgtcagtaagatagctttagatagatttggtagtatg
gtgctcacgtgtatcctctctgttgttgatgacacacagttagttaaaaagatcatcatt
cgcgaactacaaccagtactaaaggaactaatttttgataagaatgcaagacgcccttta
ttacaacttcttcatccaaattgttcacgttatctcagtccagatgatttgtctttatta
gattcgtcaataccttctttactaacaaagggtggctcagaaccagaatcggagaccaaa
tcgtcagaggccaaggatgatgatgtggacatgagtgatgcagaagagaatgtaaaatca
gtagccggtgggaaaaaagatcccactctaagaagaaaagagctgttggttgatagtgga
cttgctgagagtctcattgatgcatgctgtgagagttctgaggagttactaaaatcaaat
catggaaaagaggtcttgtttgaggttgcgacagggggtgcagataagcttctccaccca
catttggacgaaaagttggattctttacatgaatctatagcatctgaggtatcagctcct
aaatccgaagggcaagaacatcttctagagaacttccattcaagccggacaataagaaaa
cttatactcgattgcccttctttcgcttccactttgtgggaaaatacttttaaagggaat
tgcaagacgtgggcccaaggtcacagtgcgaaagttgttagcgcatacatggaaacctcg
gatcctaaggtgcttaaactggcaaagaaagagttgaagccgttattagatcaaggttta
cttaaattacccgacaagagtcaaccaaagaaagaagagtaa
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