Helianthus annuus (common sunflower): 110930796
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Entry
110930796 CDS
T05101
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
han03000
]
110930796
Transcription factors [BR:
han03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110930796
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
110930796
NCBI-ProteinID:
XP_022029871
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All DBs
Position
3:170293216..170295470
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AA seq
311 aa
AA seq
DB search
MGMFVVAPSNHHPNHHLSDHPHDHPHSLHHTISGTAAATALGVGVGVIPLLTNVATSCSN
NNNNINSIQFWQTPQGYSKKGIVSDHVFAGGGGGNGGGGGSVSTSASGSTTTCQDCGNQA
KKDCNHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLVVTSTGGGVTAAGSSASTSGS
KKPRLVSRTTTPSHTSTSRSFGTSSSHHQDAKFMQSLPGQVRAPAVFKCVRVTAVEDGDD
EYAYQACVTISGHVFKGFLYDQGVETRDQTNVPNLSELHLGGGGGGGRNVSCCLTSPPLN
PPAGYSGGLLG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgtttgttgttgctccctctaaccatcatccaaaccatcatctctccgatcat
cctcatgatcatcctcattctctccaccacacaatctccggcaccgccgctgcgacggcg
cttggtgtcggagtgggtgtcattccacttttaactaatgttgccactagttgtagcaat
aataataataatattaatagtattcagttctggcaaactccacaaggttattcaaaaaaa
ggtatagtctccgatcatgtgtttgccggtggtggtggaggtaacggtggtggtggtggg
tcggtgtccacgtcagcttcagggtcgacaacaacgtgtcaagattgtgggaaccaagcg
aagaaagactgcaaccaccggcggtgtagaacttgttgtaaaagtagagggtttgattgt
gctactcacgtgaaaagcacgtgggttccggcagctcgccgtcgtgaacgtcagctggtt
gttacttccaccggtggtggtgtaactgcagctggttcttcagcttccacttcagggtct
aagaagcctcggcttgtttctcgtactacaacaccttctcatacttctacttctagaagc
tttggaactagctctagtcatcaccaagatgctaaattcatgcaatcattgccgggtcaa
gtacgcgctccggcggtgttcaagtgcgttcgagtaaccgcagtcgaagatggagacgac
gaatacgcataccaagcatgcgtaaccatcagtggtcatgtgttcaaaggcttcctctat
gatcaaggagttgaaacacgagaccaaaccaacgtgccgaatttatccgaattgcattta
ggcggtggtggtggcggagggcggaatgtgagctgttgtttaacatcaccaccactaaac
ccaccggcaggatacagtggaggattgcttggttga
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