Helianthus annuus (common sunflower): 110930902
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Entry
110930902 CDS
T05101
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110930902
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
110930902
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
110930902
NCBI-ProteinID:
XP_022029988
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Position
3:171991770..172073585
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AA seq
750 aa
AA seq
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MAEVMNMPVDAVEGGSNLDRKDDGDVNGTGTATGDVEDNNNSIPNEHPDASPPPPPPPSR
RHDRDSRERRNDDRDIDRPPNRRSDYYEHRNRSPTGPPHRDYKRRAASPNSPPYRDRRGG
HSPPPRRTSPFPPYKRSRRDDGGYDGRRGSPRGGFGSGDRRFGYDYPGGYDRDMGGRPGF
PDDRPRGRYGGRGYQGGPSDWESARGGYNDQVNNHREGLMSYKQFIQELEDDVLPSEAEQ
RYQEYKSEYISTQKRAYFDAHKGEDWLKDKYHPTNLLAVIERRNEAARKLAKEFLHDLQN
GSLDLGPGVTASSANKSGRTSNPASEDESDLGGKKRRHGRISKETDSFSAAPKAHPISSE
HRRIQADVEQAQALVKKLDFEKGIEDNILSRADNERSHRDKSHSGSSGPVVIIRGSTSVK
GLEGVELLDTLLTYLYRVHGLDYYGLSEKSEPKGFRHVRADSKNSDVKINGSEWEKKLDT
RWQERLKGQDPLEIMTAKEKIDAAAAESLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAE
FVHKHLKLKHPELAIEVTSKVREDLYFQNYMNDEDAPGGIPIMQTSLLKDRPQRHRPGIA
NRLKDNRREHDGRINNGERFDRGENPENDGGGEGHPDDQMFDSFGGQSLHTPFPADIPPP
PVLMPVPGAGPLGPFVPAPPEVAMRMLRDQGGPPPFEGGGRNGRSGPQISGPAPIIALPP
SFRQDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggtgatgaacatgccagtggatgccgtagaaggtggcagcaacctagatcgt
aaagacgacggcgacgttaacggcaccggcaccgccaccggcgacgttgaagacaacaat
aactccattccaaacgaacatccagacgcatctccaccaccaccaccgcctccttcgcga
cgccacgaccgtgactccagagagagaagaaacgatgacagagacattgatcgtccacct
aatcgtcgttctgattactacgaacatcgtaatcgttctcctactggtccacctcacaga
gattacaagcgccgtgctgctagccctaattctcctccgtatcgtgaccgtcgtggtgga
cactctcctcctcctcgtaggacgtctccgtttcctccgtataagcggtctcgtagggac
gacggtggttacgacggtcgccgtggtagtcctcgcggtggtttcggatctggtgataga
aggtttggatatgattaccctggtggttatgatcgtgatatgggtggcaggcctggcttc
cccgatgacaggcctcgtggtaggtacggcggtcgtgggtaccaaggtggtccgtctgat
tgggaatcggctcgcggaggttacaatgatcaggtcaataaccacagagaagggttgatg
tcttataagcaatttattcaggagcttgaagatgatgttctgccatcagaagctgaacaa
aggtatcaagaatacaagtcagagtatatatcaactcagaaacgggcttattttgatgct
cataaaggcgaagactggttgaaagataaatatcaccctacaaatctgctcgcggttatt
gaaaggagaaatgaggcggctcgaaagctggctaaggagtttttgcatgacttgcaaaat
gggtcattagacttaggaccgggtgttactgcttcatccgcaaacaaatcagggcgaaca
agtaatcccgcttcagaagacgagtcagatttgggcggtaaaaaaagacgtcacgggcgt
atttcaaaagaaaccgactccttttcagcagccccgaaagcccacccgatcagctctgaa
cacaggcggattcaagccgacgttgaacaggcacaagcccttgttaaaaaacttgacttt
gaaaaagggatagaagataacatattatctagggctgataatgaaagatcacacagggat
aagtcgcattctgggtctagtggtccagtcgtaatcatacgcgggtcaacctcagtcaaa
ggtcttgaaggtgttgagttgctggatacacttttgacatatctgtaccgcgttcacggt
ttggattattacggattgtccgaaaaaagcgaacctaagggtttccgtcacgtgagagca
gactccaaaaattctgacgtgaaaattaacgggagcgagtgggaaaagaaactggataca
cgttggcaagaacgattgaagggtcaagacccgttggagataatgactgcaaaggagaag
atagatgctgcagcagctgagtcgttggatccgtatgtcagaaaaatccgggatgaaaaa
tacgggtggaaatacggttgtggggctaagggatgtacgaagctatttcatgctgctgaa
tttgttcataaacatttaaagctgaaacaccctgaacttgcaattgaagtaacctctaaa
gttcgtgaagatctgtattttcaaaactatatgaacgatgaagatgcacctggtgggata
cctattatgcagacgtcattattgaaggataggccccaaaggcataggcctggtattgcc
aaccgattgaaagataaccggagagaacatgatggcagaatcaataacggtgaaagattt
gataggggcgagaatcccgagaatgatggtggtggtgagggacatcctgatgaccagatg
tttgactcttttggtggtcaaagtcttcacacaccattccccgcagacattcctccccct
ccagtgttgatgcctgtacctggtgctgggccattgggtccgtttgtccctgctcctccc
gaagttgcaatgagaatgctccgagatcagggtgggccgcccccttttgaaggtggtggt
agaaatgggcggagtgggccccagattagtggtccagctccaataattgctttacctcca
tcgtttagacaggacccccgtcgtttacgaagctatcaagaccttgatgctccagaagat
gaagtcactgtgatagactacaggagcctctag
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