Helianthus annuus (common sunflower): 110932936
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Entry
110932936 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110932936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110932936
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110932936
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110932936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110932936
NCBI-ProteinID:
XP_022031880
LinkDB
All DBs
Position
4:<12769342..12770015
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AA seq
176 aa
AA seq
DB search
YKFCIWQFNFREFNVNDDVFANDSVELLKQSGIDFKKNNENGIDARRFGELLISSGIVLN
DSVYWVTFHSGYDFGYLLKVLTCQNLPDTQSGFFSLINMYFPTIFDIKHLMKFCNSLHGG
LNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKDNFFSGSLEKYAGVLYGLGVDN
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
tataagttttgcatatggcagttcaatttccgtgagtttaacgtgaatgacgatgttttt
gcaaatgattctgttgagctgttgaaacagagcggtatcgattttaagaaaaataacgaa
aacggaatcgatgcgcgtagatttggcgagttgttgatatcttcagggattgtgctgaat
gatagtgtgtattgggtaacatttcacagtggatatgatttcggatatttgttgaaagtg
ttaacatgtcagaatctgcctgatacacaatctggattttttagtttgattaatatgtat
tttcccaccattttcgatattaaacatctgatgaagttctgcaacagtcttcatggtggg
ttgaataagttagctgagttattggaagtcgaaaggattggtgtttgtcatcaagcgggt
tcggatagtctgcttactgcgtgtactttcaggaagttgaaggataatttcttcagcggc
tcgttggagaagtatgctggtgtcttgtatggtttaggtgtcgataattga
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