KEGG   Helianthus annuus (common sunflower): 110935640
Entry
110935640         CDS       T05101                                 
Name
(RefSeq) protein SMG7
  KO
K14409  protein SMG7
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110935640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110935640
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     110935640
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110935640
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 110935640
NCBI-ProteinID: XP_022033705
LinkDB
Position
6:105769027..105773289
AA seq 906 aa
MDKDKAAAAVASSSSHDLAQRLYDKNIELENKRRKSAQARVPSDPNAWHQMRENFETIIL
EDHSFSEKHSIEFALWQLHYRRIEEFRAHYSAASQARARPDRASKIRLQFKTFLSEATGF
YHDLILKIRAKYGLPIGQFYPEQENHNVKQKDGKKSIEIKKGLISCHRCLIYLGDLARYK
GLYGEGESKSRDYAAASSYYLQAASLWPSSGNPHHQLAILATYSGDELMAVYRYFRSLAA
EHPFSTARDNLIVAFEKNRQSYSQLHVDSNGPVKESPARTKGRGRGKADLVTRSKEPITD
TDVDKASAMRQTFKAFRVRFVRLNGILFTHTSLETFEEILSLVINALQELLSSGPEEELS
FGTDSDESGLFIVILVSILIFTVNNVKGGTEGQSYADIVQNTVLLKSALITFYEIIGQLL
KRCIELADPLSSFLLPGILVCVEWIACHSDVVIPKEPDENRSTAQFHFWSYCVSLFNKLL
SAGLVSYDDDDEDVSCFTDMTRYEEGDNEYQPALWEDFELRGFLPLEPAHTFLDFSRKHS
DSKKDKVARVKRILSAGKVIADKITIDHKKVRFDSKLNKFVIGVETQKDSGSSSKSYGDT
TATRVVKQLKVESHVEGEEEDEVIVFRPNLIDSRTEVLSSKGSQQEGFENVQTKDVSSGP
HVTMPQSNFHQVYTNSQSLLPVNNYTHSTGQPVTQSIGQPYQFQTPLWSGDSRQVASGLQ
GLSLLENGQPDMHRISNATGMMYAGPSQSMARPSVIDTRTNTIALSEPDLYHVGRNTSLA
SSLKVSTSRPIRHLGPPPGFSSVRPPKQVNEPNSAALGQNPLNDDYSWLDGYQLQQSSMK
GGGVQPSNLSSHSQYMNDSVPTSGFPFPGKQVPMVRFEGETQNNQQQYIPQMDQQGQSIW
KGNHFV
NT seq 2721 nt   +upstreamnt  +downstreamnt
atggataaggataaagcagcagcagcagttgcttcttcttcgtcacatgaccttgctcaa
cgtctttatgacaagaatatagagttggaaaataagcgccgtaagtcagctcaagcaaga
gtgccgtcagacccaaatgcttggcaccaaatgcgtgaaaattttgaaacaataatactt
gaagaccacagcttttctgagaagcacagtattgaatttgctctctggcagttacattac
agacggattgaagaatttagggctcactacagtgctgcatctcaggctagggctcgacca
gatcgagcttcaaaaatacgcttacagtttaaaactttcctctcagaagctactggtttt
taccatgatttaattttaaaaatcagagccaaatatggtctccctatagggcagttttat
cccgagcaagagaatcataacgtgaagcagaaagatgggaagaaatccattgagattaaa
aagggtttgatatcctgccaccggtgtttgatatacctaggggatcttgcacgttacaaa
ggactgtatggtgaaggagaatcaaaaagtcgtgattatgcagcagcttcaagttattac
ttgcaagcagcttctttgtggccatcaagtgggaatccacatcatcagcttgctatattg
gccacctattcaggagatgaattgatggctgtatatcgttacttccgaagtctggcagct
gagcatcctttctcgacggcaagagacaacttgatagtagcttttgagaagaaccggcaa
agttattctcagttgcatgttgattcaaacggtcctgtcaaggaatcacctgctcggaca
aagggtagaggaagagggaaagcagatctagtaactcgatcaaaggagccaattactgat
actgatgtggataaagcaagtgcgatgcgccaaacgtttaaagcatttcgtgttcgtttt
gttcgcttgaatggtattcttttcacacacacaagcttggagacattcgaagaaattctg
tccttagttatcaacgctttgcaggagcttctttcttctgggccagaagaggagctgagt
tttggaacggattcagatgaaagtgggcttttcattgtgatactcgtttccatactcata
tttactgtaaataacgtgaaaggtgggactgaaggtcagagctatgcagatatcgtacaa
aacactgtgcttctaaaaagtgctctcattactttctatgagattattggtcaactactt
aaaagatgcatagagttggctgacccgctctcaagctttctgttgcctggcattctcgtg
tgtgtggaatggattgcctgtcattctgacgttgttatacctaaggagcctgatgaaaat
cgatcaacagctcagttccatttttggagctactgcgtgtctttatttaataaactgtta
tctgccggtctggtctcctatgatgatgatgatgaagacgtgagttgctttactgatatg
acaaggtatgaagagggggacaacgagtaccagcctgcgttgtgggaggattttgagcta
agaggattcctgccccttgagcctgcacacacatttttggatttttcaaggaagcattct
gacagcaaaaaggataaagtagctcgtgtgaagaggattttgtctgcagggaaagttatt
gcagataagattaccattgatcacaagaaagtgaggtttgactcgaaactgaacaagttt
gttataggtgttgagacccagaaagactcaggcagcagctctaaatcatatggagataca
actgcaaccagggtagttaaacagttgaaggtggagtcacatgtggaaggtgaagaagag
gatgaagtgattgtgtttagaccaaatttaattgacagtcgaacagaagtgctctcttca
aaagggagccaacaagaagggtttgaaaatgtgcaaactaaagatgttagttctggtcct
catgttacaatgccacagtctaattttcaccaggtgtacaccaactcacagtcccttttg
cctgtcaacaattacactcatagcaccgggcagccagttacacaaagcattgggcagccg
tatcagtttcagactccactgtggtctggcgacagcagacaagttgctagtggattgcaa
ggtttgagcttgctggaaaatgggcagcctgacatgcacaggatttcaaatgctactggt
atgatgtatgccggaccatctcaaagcatggcaaggccctctgtgattgatactcgtacg
aatacaattgctctatctgaacccgatctttaccatgtggggcgaaacacatccttagct
agctctttgaaagtttctacaagcagacctataagacaccttggaccgccacctggtttt
agctctgttcgcccccccaagcaagtcaacgagcccaattctgctgcattgggtcagaat
cctctaaatgatgattacagctggttagatggatatcagttgcagcaatcatcaatgaag
ggtggtggtgttcagccatcaaatctgagttcccactcccagtacatgaatgattctgta
cctacatctggcttcccatttcctgggaaacaagtcccaatggtgcggtttgaaggggaa
acacagaataatcaacaacaatatattcctcaaatggaccagcaagggcagtccatatgg
aaaggcaatcactttgtgtga

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