Helianthus annuus (common sunflower): 110935640
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Entry
110935640 CDS
T05101
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110935640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110935640
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110935640
mRNA cycle factors
Common to processing body (P body) and stress granule
110935640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
110935640
NCBI-ProteinID:
XP_022033705
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All DBs
Position
6:105769027..105773289
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AA seq
906 aa
AA seq
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MDKDKAAAAVASSSSHDLAQRLYDKNIELENKRRKSAQARVPSDPNAWHQMRENFETIIL
EDHSFSEKHSIEFALWQLHYRRIEEFRAHYSAASQARARPDRASKIRLQFKTFLSEATGF
YHDLILKIRAKYGLPIGQFYPEQENHNVKQKDGKKSIEIKKGLISCHRCLIYLGDLARYK
GLYGEGESKSRDYAAASSYYLQAASLWPSSGNPHHQLAILATYSGDELMAVYRYFRSLAA
EHPFSTARDNLIVAFEKNRQSYSQLHVDSNGPVKESPARTKGRGRGKADLVTRSKEPITD
TDVDKASAMRQTFKAFRVRFVRLNGILFTHTSLETFEEILSLVINALQELLSSGPEEELS
FGTDSDESGLFIVILVSILIFTVNNVKGGTEGQSYADIVQNTVLLKSALITFYEIIGQLL
KRCIELADPLSSFLLPGILVCVEWIACHSDVVIPKEPDENRSTAQFHFWSYCVSLFNKLL
SAGLVSYDDDDEDVSCFTDMTRYEEGDNEYQPALWEDFELRGFLPLEPAHTFLDFSRKHS
DSKKDKVARVKRILSAGKVIADKITIDHKKVRFDSKLNKFVIGVETQKDSGSSSKSYGDT
TATRVVKQLKVESHVEGEEEDEVIVFRPNLIDSRTEVLSSKGSQQEGFENVQTKDVSSGP
HVTMPQSNFHQVYTNSQSLLPVNNYTHSTGQPVTQSIGQPYQFQTPLWSGDSRQVASGLQ
GLSLLENGQPDMHRISNATGMMYAGPSQSMARPSVIDTRTNTIALSEPDLYHVGRNTSLA
SSLKVSTSRPIRHLGPPPGFSSVRPPKQVNEPNSAALGQNPLNDDYSWLDGYQLQQSSMK
GGGVQPSNLSSHSQYMNDSVPTSGFPFPGKQVPMVRFEGETQNNQQQYIPQMDQQGQSIW
KGNHFV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggataaggataaagcagcagcagcagttgcttcttcttcgtcacatgaccttgctcaa
cgtctttatgacaagaatatagagttggaaaataagcgccgtaagtcagctcaagcaaga
gtgccgtcagacccaaatgcttggcaccaaatgcgtgaaaattttgaaacaataatactt
gaagaccacagcttttctgagaagcacagtattgaatttgctctctggcagttacattac
agacggattgaagaatttagggctcactacagtgctgcatctcaggctagggctcgacca
gatcgagcttcaaaaatacgcttacagtttaaaactttcctctcagaagctactggtttt
taccatgatttaattttaaaaatcagagccaaatatggtctccctatagggcagttttat
cccgagcaagagaatcataacgtgaagcagaaagatgggaagaaatccattgagattaaa
aagggtttgatatcctgccaccggtgtttgatatacctaggggatcttgcacgttacaaa
ggactgtatggtgaaggagaatcaaaaagtcgtgattatgcagcagcttcaagttattac
ttgcaagcagcttctttgtggccatcaagtgggaatccacatcatcagcttgctatattg
gccacctattcaggagatgaattgatggctgtatatcgttacttccgaagtctggcagct
gagcatcctttctcgacggcaagagacaacttgatagtagcttttgagaagaaccggcaa
agttattctcagttgcatgttgattcaaacggtcctgtcaaggaatcacctgctcggaca
aagggtagaggaagagggaaagcagatctagtaactcgatcaaaggagccaattactgat
actgatgtggataaagcaagtgcgatgcgccaaacgtttaaagcatttcgtgttcgtttt
gttcgcttgaatggtattcttttcacacacacaagcttggagacattcgaagaaattctg
tccttagttatcaacgctttgcaggagcttctttcttctgggccagaagaggagctgagt
tttggaacggattcagatgaaagtgggcttttcattgtgatactcgtttccatactcata
tttactgtaaataacgtgaaaggtgggactgaaggtcagagctatgcagatatcgtacaa
aacactgtgcttctaaaaagtgctctcattactttctatgagattattggtcaactactt
aaaagatgcatagagttggctgacccgctctcaagctttctgttgcctggcattctcgtg
tgtgtggaatggattgcctgtcattctgacgttgttatacctaaggagcctgatgaaaat
cgatcaacagctcagttccatttttggagctactgcgtgtctttatttaataaactgtta
tctgccggtctggtctcctatgatgatgatgatgaagacgtgagttgctttactgatatg
acaaggtatgaagagggggacaacgagtaccagcctgcgttgtgggaggattttgagcta
agaggattcctgccccttgagcctgcacacacatttttggatttttcaaggaagcattct
gacagcaaaaaggataaagtagctcgtgtgaagaggattttgtctgcagggaaagttatt
gcagataagattaccattgatcacaagaaagtgaggtttgactcgaaactgaacaagttt
gttataggtgttgagacccagaaagactcaggcagcagctctaaatcatatggagataca
actgcaaccagggtagttaaacagttgaaggtggagtcacatgtggaaggtgaagaagag
gatgaagtgattgtgtttagaccaaatttaattgacagtcgaacagaagtgctctcttca
aaagggagccaacaagaagggtttgaaaatgtgcaaactaaagatgttagttctggtcct
catgttacaatgccacagtctaattttcaccaggtgtacaccaactcacagtcccttttg
cctgtcaacaattacactcatagcaccgggcagccagttacacaaagcattgggcagccg
tatcagtttcagactccactgtggtctggcgacagcagacaagttgctagtggattgcaa
ggtttgagcttgctggaaaatgggcagcctgacatgcacaggatttcaaatgctactggt
atgatgtatgccggaccatctcaaagcatggcaaggccctctgtgattgatactcgtacg
aatacaattgctctatctgaacccgatctttaccatgtggggcgaaacacatccttagct
agctctttgaaagtttctacaagcagacctataagacaccttggaccgccacctggtttt
agctctgttcgcccccccaagcaagtcaacgagcccaattctgctgcattgggtcagaat
cctctaaatgatgattacagctggttagatggatatcagttgcagcaatcatcaatgaag
ggtggtggtgttcagccatcaaatctgagttcccactcccagtacatgaatgattctgta
cctacatctggcttcccatttcctgggaaacaagtcccaatggtgcggtttgaaggggaa
acacagaataatcaacaacaatatattcctcaaatggaccagcaagggcagtccatatgg
aaaggcaatcactttgtgtga
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