Helianthus annuus (common sunflower): 110935671
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Entry
110935671 CDS
T05101
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110935671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110935671
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110935671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
ANAPC4_WD40
Beta-prop_ACSF4
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
EIF3I
Beta-prop_EMC1_N
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Prp19
PQQ_2
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
110935671
NCBI-ProteinID:
XP_022033734
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All DBs
Position
4:6563450..6571256
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AA seq
599 aa
AA seq
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MANNKAEASMSAFTSNGEVFAHLNPKGVLKVWNTSDGTLLSEWKHPSKHDGVQYTRITCS
FVGKKRRKENSTCLVAYATNESDIYTISATDATMKWKLSRTEFGEIATLSFTNKGRKLCV
ISTDGTLCEMNSETGEILKEISIPKKYISTLAYIFDDKILAASDGHIRVLSLEDGDVLAK
FSSAVGPVLHLSSLEDTNIIITSTSSENLSVQMNESGNKKATDGPVLLMKDRPLTIDCKS
GSSGSNGENLFVLSVSDSGIAYVWNMKTKSQVNISPTKVKVEAHNSILAARLISINGDDQ
AVIHIVYGSLSSPRFALVDVATLGEDIVVDSSGGIQENRVNDEKDQKARGKKRAASDADS
ETAVVNHDNGDPNIGIQMDDHEPTIGEKLASLNIINNKEEIEEKAETSPAKPPSADSVHV
LLKQALHADDRSLLLDCLFRQNEKVITNSVSVLNPSDVFKLLECLISMIQSRGAIVACTL
PWLKSLLLQHASSIMSQESSLIALNSLYQLIESRISTFDSAVQLSSSLDLLYTKTIEDGV
DEAEEPLEPIIFEDFSDDEDQSEEDGDAMETDEEDNEQLEAVSNVSDDDPQAIDGMVDY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataacaaagcagaagcttcaatgtctgctttcacttcaaacggtgaagtattc
gctcatctaaaccctaaaggcgtcctcaaagtttggaacacaagtgatggaactttatta
tctgaatggaaacatccaagcaaacatgacggtgttcagtatactcgtatcacatgtagc
tttgttggaaaaaagcgaagaaaagaaaacagtacttgtttggtggcatatgcaacaaac
gaaagtgatatatacactatcagcgctactgatgctacgatgaagtggaaattatctaga
actgagtttggtgaaattgctactctctcatttacaaacaaagggcgtaaactttgtgtt
atcagcactgatggcacattatgtgaaatgaactcagaaaccggagaaattctaaaagaa
atatctattccgaagaagtatatttctactttggcatatatattcgatgataagatatta
gctgcatcggatggccatattagagtcctcagtttagaagacggcgacgtattagcgaag
ttttcttccgctgtgggcccagtgcttcacttgtctagtttggaggatacaaacatcatc
atcacatccacttcttccgaaaatctaagcgtgcagatgaacgaatccggcaacaaaaaa
gcaaccgatgggcccgttttacttatgaaagatcgtcctttaactatcgactgcaagagt
gggtcgagtggctccaatggagagaatttattcgtactatcggtttcagattcgggtata
gcctacgtttggaacatgaagacgaaatcacaagtaaatataagtccaactaaggttaaa
gttgaagctcacaattctatactagctgctagattgatctcaatcaacggcgatgatcaa
gctgtaattcatattgtttatggttcgttaagttcaccgagatttgcgttagtggatgtt
gctactcttggggaggatattgttgtagattcaagtggcggtattcaagaaaatagagta
aatgatgaaaaagaccaaaaagcgcggggcaagaagcgagccgcatctgatgcagactct
gaaactgcagtagtaaatcatgacaatggagatccaaacatcgggattcaaatggatgat
catgaaccaacaattggtgagaaactggctagcttaaatataatcaacaataaagaagaa
atcgaggaaaaagcagaaacgtctcctgcaaagcctcccagtgccgactcagttcacgta
cttcttaaacaagctcttcatgcagacgatcgttcccttctgcttgattgcttatttaga
caaaatgaaaaggttataacaaactcggtttctgtattgaatccgtctgatgtgttcaag
cttcttgagtgtctcatatctatgatccaatccaggggtgcgatagtagcttgtactctc
ccatggcttaaaagcttacttcttcaacatgcaagcagtattatgtctcaggaatcatct
ctcattgctctcaactcgttatatcagcttatcgaatctcggatttcaactttcgattct
gcggttcaactgtcaagttctctggacttgttatataccaagactattgaagatggagtg
gatgaagcagaagagccattggagcctatcatttttgaagactttagtgacgatgaagac
cagtctgaagaagacggtgatgccatggaaaccgatgaggaagacaatgaacaacttgaa
gcagtcagtaatgttagtgatgacgatcctcaagcaatcgatggtatggttgactattag
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