Helianthus annuus (common sunflower): 110936012
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Entry
110936012 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110936012
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110936012
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110936012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110936012
NCBI-ProteinID:
XP_022034048
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All DBs
Position
4:27526105..27528742
Genome browser
AA seq
187 aa
AA seq
DB search
MDGPPGNDCCSICHGSFNIPHQANCSHWYCGNCILQVWNHGSSLQPCKCPLCRRQITLLV
PSQASSQQIHNPEAAEILKKIEAYNRLFGSQSTSLNQRVQDLPFLLKRLFRELMDPQRSL
PFVIKARLYLALISTAVYVLSPVDIIPEALFGILGLLDDVIIALTFFLHVGTLYRSTLLR
RYGGSSG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacggaccaccaggaaacgactgttgttcaatctgccatggcagcttcaacatccct
catcaagccaattgttctcactggtattgcggaaattgcattttacaagtttggaatcat
gggtcatcactacaaccatgtaaatgcccgctttgccgtcgccagattactttgttggtt
cctagtcaggcttcatctcagcaaattcataatccggaagctgctgagattttaaaaaag
attgaagcctataatcgtctttttggttcacagtcaaccagtcttaaccagagagtgcaa
gaccttccgtttctcctcaagaggttgtttcgagaactgatggatcctcaaagatcactc
ccatttgtcattaaagcacgattatatctggcattaatatcaaccgctgtttatgtactt
agccctgtggacatcattcccgaagcgttgtttggaatacttggtctgttggatgatgtc
attatagccctcacattcttccttcatgttggcactttgtatcgatctactcttttgcgt
cgttatggaggatcttcaggttga
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