Helianthus annuus (common sunflower): 110936393
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Entry
110936393 CDS
T05101
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110936393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110936393
Membrane trafficking [BR:
han04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110936393
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110936393
Exosomal proteins of bladder cancer cells
110936393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Zn_ribbon_19
Aa-Ago_N
ENTH
Motif
Other DBs
NCBI-GeneID:
110936393
NCBI-ProteinID:
XP_035844777
LinkDB
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Position
4:complement(49015240..49021672)
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIGALKKKTASPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILGCHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGESLYYVKDRFLRFYEYTSQKDTQILPIRRPG
SVSLNQGPRTLSYSPTENAILICSDVDGGSYELYIIPKDSITRGDTVQEAKRGVGGSAVF
VARNRFAVLEKSTNQVLVKNIKNEIVKKSALPSPVDAIFYAGTGNLLCRAEDRVFIFDLQ
QRLVLGDLQTSFVRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGSWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDNPVYITKIFGNTLFCLDRDGKNRPIVIDSTEYV
FKLSLLKKRYDHVMSMIRNSELCGQAMIAYLQQKGFPEVALHFVRDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNSGIVEYAYQRTKNFERLSFLYLITGNLDKLSK
MMKIAEVKNDVMGQFHNALYLGDVQERIKILINAGHLPLAYATAKTHGLNEIVEDLADKL
NGNVPNLPSGRSSSLLFPPTPVLCGGDWPLLRTMKGIFEGGLDNAGKGGNEEYEDAADAD
WGEELDIVDVENIQNGDVSMVLDDEEAPEDNEEGGWDLEDLELPPDVETPKATTSRSAVF
VTPTAGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKSLFIDLHTGSH
SYLRAFSSAPIISLAIERGWSESASPNVRAPPALVFSFSQLEEKLKAGYKATTTGKFTEA
LRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQQELAA
YFTHCNLQLPHLRLALMNAMTVCYKAGNLITASNFARRLLETNPTAENQTKTARSVMQAA
ERNMKDSTQLNYDFRNPFVVCGATYVPIYRGQKDVLCPYCNSHFVLSHEGQLCTVCDLAV
VGSDASGLLCSPAQIR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagaccaagagtaatcgagtaaaaggcctgagtttccacagtaag
aggccgtggattttagcgagtcttcacagtggtgtgattcagctatgggactaccgtatg
ggcactctcattgatcggtttgacgaacatgacggccctgttcgtggcgtgcattttcat
cagtcgcagcctctgtttgtttctggaggagatgattacaagatcaaagtatggaattac
aagctgcatcggtgtttgtttacgctgcttggccaccttgattatattcggacggttcag
tttcaccatgagaacccctggattgttagtgctagtgatgatcaaactatccggatatgg
aattggcagtctcgtacttgtatatctgttttgactggacacaaccattatgtgatgtgt
gctttgttccatccaaaggaggaccttgtggtatcagcatcattagaccagactgttcga
gtttgggatattggtgccctaaagaagaaaacagcttcccctgctgatgatatccttcgg
ctgagtcagatgaatacagatttctttggaggggttgatgctgttgtgaagtatgtatta
gagggccatgatcgaggagtcaactgggcatcgtttcatcccactcttcctcttattgtt
tcaggagctgacgatcgccaagtgaagatctggcgaatgaatgatacaaaagcttgggaa
gtagacacattgagaggtcacatgaataatgtatcatgtgttctattccatgcaagacaa
gacatcatagtatctaactcggaggataaaagcatacgtgtttgggatgctacaaaaaga
accggccttcaaacattccgccgtgagcatgacagattctggattctcggttgtcatcct
gagatgaacctgttggcagctggccatgacagcggtatgattgttttcaagctagaaaga
gaacgccctgctttctctgttagtggtgaatcattgtactatgtaaaagaccgttttcta
cggttttacgagtacacttctcaaaaagacactcaaatattacctatccgcaggcctggc
tccgttagcttgaaccagggcccaagaaccctctcttacagcccaactgaaaatgcgata
ctaatatgttccgatgtggatggcggatcttatgaattgtacatcatccctaaagatagt
attactagaggtgatacagttcaagaggcgaaacgtggcgtcggtgggtcggcggttttt
gtggcccgaaatagatttgcagtcctcgagaagagcaccaatcaagtgttggtcaaaaac
ataaaaaatgagattgtgaagaagagtgcccttccttctccagtcgatgctatattctat
gctggtacaggtaacttgttatgtagggcagaagatagagtttttatctttgatcttcaa
caacggttggttctcggggacctacaaacttcatttgtaaggtacgttgtttggtcaagc
gatatggagagtgttgccttgcttagtaagcattcaatagttatagctgataaaaaactg
gtgcaccggtgcacccttcatgagacaatcagagtgaaaagcggttcatgggatgataat
ggcgtgttcatatacacaacgttaacccatattaaatactgtttgcctaatggagacagt
ggaatcattaaaacccttgataatccggtttatatcacaaaaatatttggaaacacactc
ttttgtttggaccgtgatgggaaaaaccggccaatagttattgattcaactgaatacgtc
tttaagttatctttactgaaaaagagatatgaccatgtaatgagcatgataagaaactct
gagctttgtgggcaagccatgattgcatatttgcaacaaaaaggtttccctgaagttgcc
ctccatttcgtaagagatgagagaacccgtttcaatttagcactcgaaagtggaaacatc
cagatagctgttgcctctgctaaagagatagatgagaaagatcattggtatagattaggg
gttgaggcccttcgtcagggtaattctggcatcgttgaatatgcatatcagaggacgaaa
aactttgagaggctatcttttctgtatttgataacaggaaacttggataagctgtctaaa
atgatgaagattgctgaggtgaaaaacgatgttatggggcagttccataatgctttgtat
ttgggtgatgttcaagaacgaatcaagattttgatcaatgctggccatctaccactagca
tatgctacagctaagacccatgggttgaatgagattgttgaagatcttgctgataaactt
aacggtaatgttcctaatttgcccagtggtaggtcttcttctcttttgttccccccaaca
ccggtcttgtgcggtggggactggccattgttgaggaccatgaaagggatatttgagggt
ggtcttgataacgctggaaaaggtggaaacgaagagtatgaagatgctgctgatgctgat
tggggtgaggagttggatattgtggatgtggagaatattcaaaatggtgatgtcagcatg
gtgctggatgatgaagaagcacctgaagataatgaagagggaggttgggatcttgaggat
ctcgaacttcctccggatgttgaaaccccaaaagccaccactagtcgttctgctgtattt
gtaacaccgactgctggtatgcctgtgagtcagatatgggtgcagaagtcatctcttgct
gctgagcatgcagcagctggcaactttgacaccgccatgcggttactgagccgccagctt
ggtataaagaatttcacaccgctgaagtccttgttcattgatcttcacacgggaagtcat
tcttacttgcgtgcgttctcatcggctcccataatctcattggccatcgagaggggttgg
agtgagtcagcaagtcctaatgtccgggccccgcctgcactcgtgttcagtttctctcag
ttagaagaaaaactcaaggccggttacaaagccacaaccacagggaagttcaccgaagct
ttacgcctctttttaagtattctccataccatccccctgattgttgtcgagtcaagaaga
gaagtggatgaagttaaagagctgattattatcgtgaaagaatatgttttgggcttacag
atggaacttaaaaggagggaactgaaagacaaccctgttcgtcaacaagaactggcggct
tatttcactcactgcaaccttcagctaccgcacttgagacttgccttgatgaatgctatg
actgtgtgttacaaggctggtaatctgataacagcatcaaactttgcccggaggcttttg
gagaccaacccgactgcagaaaaccaaaccaaaaccgcccgttctgttatgcaggctgct
gagaggaacatgaaagattccacacagttgaattatgactttagaaacccgtttgttgtt
tgtggggcaacttatgttcctatttatcgcggacaaaaggatgtgttatgcccttactgc
aattcacactttgttctttcccatgaaggccagctttgtactgtttgtgaccttgctgtg
gtcggatcagatgcttccggcttactttgttctccagctcagatcagataa
DBGET
integrated database retrieval system
