Helianthus annuus (common sunflower): 110936422
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Entry
110936422 CDS
T05101
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110936422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110936422
Enzymes [BR:
han01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110936422
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110936422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110936422
NCBI-ProteinID:
XP_022034497
LinkDB
All DBs
Position
4:complement(81147860..81162594)
Genome browser
AA seq
1399 aa
AA seq
DB search
MNRGMIQDTAISFTKQPYIEDVGPRRIKSIKFSLFSDADVLKMGEVQVSRSQCYGFEDSK
GTVANGLLDPHMGPPNKFGTCETCHGSFQDCPGHFGYIKLALPVFNVGYLPHIVEILKCI
CKFCSRILLSEEERVDYLKKMRGPNMDHLKKNSIYKMVVKRCTAMASSKKAVTCSRCGYI
NGIIKKAVGTVGVIHDRSKLQDNTSKESDDAISNMKEMKIPASLSFMLNPDKVLKLFKKM
LDVDCDLLYLADRPEKLIISTIPVPPIPIRPSVKLDATSNENDVTLKLGEIIRINASVNS
LLTDTGASNQKNLVCWEHLQYTVAQYINSDVRLPPSFTLNQNSKPMAGLIQRMKGKQGRF
RGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSHHNIERLRQAVRNGT
SKYPGAKHIRKPDGTMMSLSINARKRLADELKFGDVVDRHLIDGDVVLFNRQPSLHRMSI
MSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK
NGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCCYMGDAMDILDLPTPAIIKPIELWT
GKQLFSVLLRPHADMKVYLNLTLTEKSYTKASGKRVKPYETMCPNDGYVCIYNSELISGQ
LGKATLGNGNKDGLYSVLLRDYNSHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGDNL
NDNTIRIISEGNKKCDNFILDFNNGKLKLQPGCNAAQTLEAEITGVLNKIRDETGKVCME
KLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFMDRSLPHFPRQSKTPA
AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVYYDNT
VRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKATCPAGQHRGLSSSEIREA
VDERLSMHDMTPEGGCSEDFRKKLKQFIDKYAATLEITKRALLPHDGQLDDEQSSIIEKV
SQSICGITSQQLQVFLDTCIFRYHQKKIDAGTNIGAIGAQSIGEPGTQMTLKTFHFAGVA
SMNVTLGVPRIKEILNAAKKISTPVITAKLRTNDNISYAKLVKGQMERTLLGQVAKSIKL
VLGLRSASIVITLDKSTIQALQLSVDAHTVKESILKTPKIKLKEHHIKVLDARKLEINPP
SDREKLYFDLHGLRNRLPTVVVKGIGTIERAVINKKKEQDKFNLLVEGTGLQAVMGMEGI
NGHETTSNHILEVQSTLGIEAARRSIIKEIQYTMESHGMSIDIRHMMLLADVMTYKGEVL
GITRFGIQKMKESVLMLASFEKTSDHLFNASVNGRVDKIEGVSECIIMGIPMQTGTGIIG
VKQRVPQLQLCKGSDVIIS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaggtatgatacaagacactgcgatctcattcacgaagcaaccttacatcgaa
gatgttggacctcgaagaattaagagtattaaattctcattgttttctgatgcggatgtg
ctcaaaatgggggaagttcaagtgtctcgttcgcagtgttatggttttgaagatagtaaa
ggcaccgttgccaatggattgttggatccgcatatgggtcctccaaacaagttcggcaca
tgcgagacgtgccatggtagctttcaagattgccctggtcactttggttacataaaactt
gcgttgccagtatttaatgtcggttatttacctcatattgtggaaattttgaagtgcata
tgcaagttttgttcccgaatattgttgtctgaggaagaacgcgtagactacttaaagaag
atgagaggtccaaatatggatcatctgaagaagaatagtatttataaaatggtagttaaa
aggtgcactgctatggcaagtagtaagaaagcggtaacatgctccagatgtggttatata
aatggtataattaaaaaagctgttggaacagtgggagttatacatgatcgtagcaagctt
caagataatacctcaaaggaatccgatgatgctatttctaacatgaaggagatgaagata
cctgctagtttatcctttatgttaaaccctgacaaagttcttaaactttttaagaagatg
ctggatgtggattgtgatttgctttatcttgctgatagacccgagaaactcattatatca
accattcccgttcctcccatacctattcgtccatctgtcaaacttgatgcaacaagcaat
gagaatgacgttaccctgaaattgggagaaattataagaatcaatgcttctgttaatagc
ttgttaaccgacacaggcgcttctaaccaaaaaaacctggtttgttgggagcatctgcaa
tatacagttgcacaatatataaacagcgatgttcgtttaccaccatcgtttactcttaat
caaaactccaaaccaatggctggtcttattcaacgtatgaagggaaaacaaggacgtttt
cgtgggaatttgtctgggaaacgtgttgagtataccggtagaactgttatttctcccgac
ccaaatttaaagattacagaggtggcgattcctatcttaatggctcggattttgacgtac
cctgagcgtgtttcacatcacaatatagagagactgagacaagctgtgcgtaatggtact
tctaaataccctggcgcaaagcatatcagaaagccagatggtaccatgatgtctttgagt
atcaatgcgagaaaacgtttggctgacgagttgaaatttggtgacgtggttgatcgtcat
ttaatagacggtgacgttgtcctcttcaacaggcagcccagtttgcatcgtatgtcaatc
atgagtcacagagctagaattatgccttggaggacattgaggttcaatgaatctgtttgt
aatccgtacaatgctgactttgatggtgatgagatgaatatgcatgttccacaaactgaa
gaggcccgaacagaggctctaatgctaatgggggtgcaaaacaatttatgcacaccaaaa
aatggggagattttggttgcatccactcaagattttttaacatcctcatttcttataaca
agaaaagacacgttttatgaccgtgcttcattttcactcatgtgttgttatatgggtgat
gcaatggatatacttgatttgccaactcctgctattattaagccaatagagctttggact
ggtaaacagttatttagtgtcctgttgcgaccacatgcagatatgaaagtttatctgaat
ctgactcttacggaaaagagttacacgaaagcgagtggaaaaagggtgaagccgtatgag
acaatgtgccccaatgatggatacgtctgcatctacaacagtgaacttataagtggccag
cttggaaaggctactttagggaatggaaacaaagatggactttactcggttcttcttagg
gactacaattcacatgctgcagctgcttgtatgaaccgcttagcaaaactaagtgctcgg
tggataggaaatcatggattctcaattggaattgatgatgttcaacctggcgataatttg
aatgacaatacaatcaggattatttccgaagggaacaaaaaatgtgacaacttcattctc
gattttaataacgggaagctcaaactgcaacctggttgtaatgctgctcagacccttgaa
gcggagataacaggtgtcctaaataaaatcagagatgaaaccggaaaggtttgtatggaa
aaactacattggaggaacagcccgttaattatgtctcagtgtgggtcgaaaggatctcct
atcaatattagtcaaatgattgcatgtgttggtcaacaatcagttggaggtcaacgtgct
ccaaatggatttatggaccgaagtcttccacattttcctagacagtcaaagacacccgct
gcgaaagggtttgtagcaaactctttttatagcggtttaaccgctactgagtttttcttc
cacacaatgggaggacgagaaggtcttgtggatactgcagttaagacggctgacactggt
tatatgtcccggaaactgataaagggattggaggacttatctgtttactatgacaataca
gtaagggattccagtgcatgtattgttcaatttacatatggtggggatgggcgggacccg
tctcagatggaaggaaaggcaggatttcctcttaattttgatcggttattgatgaaagcc
aaggctacatgtcctgctgggcaacatagaggtctttcttcttcagagattcgggaagca
gttgacgaacgtctttctatgcatgatatgactcccgaagggggatgctctgaggacttc
cggaagaaattgaaacagtttattgacaaatacgctgcaacattagaaatcactaaacga
gctcttctaccgcatgatggacaactagacgatgaacaatcttcaatcatagaaaaggtt
tctcaaagcatatgtggcatcacttctcagcagctgcaggtattcttagatacatgcatc
tttcgttaccatcaaaaaaagattgatgccggaacaaatatcggtgcaattggtgctcaa
agtattggagaaccaggaacacaaatgacgttaaaaacctttcattttgctggagttgca
agcatgaatgtcactctcggggttcctcgtattaaggagatcttaaatgcagccaagaaa
atcagcacgcctgtcatcactgcaaaactcagaactaatgataacatatcgtatgctaag
ctggtcaaaggtcaaatggagagaactcttttggggcaggttgcaaagagtataaagctt
gtactgggattaagatctgcttctattgttattacccttgacaagtcaacaattcaagcc
ctacaactttccgtagacgcacatactgtgaaagaatcaatactaaagactcccaaaatc
aaactgaaagaacatcatatcaaggttttggatgctaggaaacttgaaattaatcctcca
tctgatagggaaaaactttattttgatcttcatgggctcagaaataggcttccaacagtc
gttgtgaagggcattggtaccattgaacgtgctgtgataaacaagaaaaaggagcaggac
aagtttaacttgcttgtagaaggaacgggccttcaggcagttatgggcatggaaggaata
aatggacatgaaacgacaagtaatcatattctggaggtacaaagtacacttggcattgaa
gctgcaagaaggtcaattattaaagagatccaatacactatggaaagccacggaatgagt
atagatattcgacatatgatgcttttagctgatgtcatgacgtataagggggaagttttg
gggatcacgagatttgggattcaaaaaatgaaagaaagcgtgttgatgttggcgtcattt
gagaaaacatccgaccatctttttaatgcttctgtgaatggtagagtagacaaaatagaa
ggtgttagtgaatgtattatcatgggcataccgatgcagacgggcacaggaattatcgga
gttaaacaaagggttcctcagcttcagctatgcaagggatcagatgtgatcatatcataa
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integrated database retrieval system
