Helianthus annuus (common sunflower): 110936667
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Entry
110936667 CDS
T05101
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110936667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110936667
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110936667
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Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
F-box
F-box-like
Urocanase_N
Glyco_hydro_106
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110936667
NCBI-ProteinID:
XP_022034772
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Position
4:complement(59131947..59135096)
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AA seq
358 aa
AA seq
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MSTMQGDELNIFFDKLVVFGGGSRVITEWKDIPMELLMRIVCLLDDRTVIVASGVCSGWR
DAICLGLTHLSLSWCTNNMNNLVLSLAPKFTNLRVLNLRQKDKPLLDDNAVETIANNCHD
LEDLDLSKSFKLGDQSLYALARGCPELTKLNISGCSGFSDHGLKFLSGYCRKLKVLNLCG
CVKAATDKALKSIGYNCRQLESINLGWCEGVGDVGVMSLAYGCPDLHAIDLCGCVFITDE
SVIALANNCLHLRSLGLYYCQNITDRAMYALAHSRVKNRHEVLWESVKTRYEEEGLMNLN
ISQCTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCTCRTVTPYSRSAQV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatgcaaggtgatgaattgaacattttctttgataaattggtggtgtttgga
ggtgggtctagggttattacggaatggaaagatattccgatggagcttttgatgaggatt
gtgtgtttgttggatgatcggacggtgattgttgcttctggagtttgtagtggatggagg
gatgctatttgtttggggcttactcatctttcactctcttggtgcacaaacaatatgaac
aacctggtgctttctctagctcccaaattcacaaatctaagggttttgaaccttcggcaa
aaagataaaccgctgcttgatgataatgcagtcgagaccattgctaataactgtcatgat
ttggaggatcttgaccttagcaagagctttaaacttggtgatcagtccctttatgctttg
gctcgaggctgtccagaacttactaagctcaacatcagtggctgctccggttttagtgac
catggtctcaagtttcttagtggctactgtagaaagttgaaggttttgaacctttgtggg
tgtgtgaaagcggccactgataaggccctgaagtctataggatacaactgtcgacaactt
gagtcgataaatcttggttggtgcgagggagttggtgatgttggagtgatgagtttagct
tatgggtgtcctgatctccatgctattgatttgtgtggctgtgtctttataacagatgag
agtgtgatagcattggcaaacaattgcttacatcttaggtctcttggcctatactattgt
caaaacatcacggaccgggcaatgtacgctttggcccacagccgagtaaaaaacagacat
gaagtattatgggaatctgtcaaaacccgatacgaggaagaaggcctcatgaacctaaac
atcagtcaatgcacggctctaacaccacccgctgttcaagcactctgcgattcatttcct
gcgcttcatacctgcccgggtaggcattctctcataataagtggctgcttgaacttaacc
tcggtccactgcacttgtcgtaccgttacgccttattctcgttccgctcaggtctga
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