Helianthus annuus (common sunflower): 110936668
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Entry
110936668 CDS
T05101
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110936668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110936668
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110936668
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box
F-box-like
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
110936668
NCBI-ProteinID:
XP_022034773
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Position
4:complement(59104800..59109527)
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AA seq
370 aa
AA seq
DB search
MSTMQGGKLMEFGGGRRVKREWQDIQTELLMKIVSLLDDRTVIVASGVCSGWRNAICSEL
THLSLSCCIIVSYYVVSVAFMNFGPHVRCTNNMNNLVLSIVPNFTNLRVLTFRKKGEQPL
LDDKSVETIANNCHELEDLDLSMNSRLGDRSLYALARGCPNLTNLNISCCSAFSEHGLDF
LSRYCRKLKMLNLFGCYKAATNKALKAIGDNCRQLESINLGRCYEVGDAGVKNLAYGCPH
LSVIDLSECFFITDESVIALANNCLHLRSLNLYYCIRITDRAMYALAHSRVKNKDEILWE
SVKSQYEEEGLMNLNISQCKDLTPPAVHAICDSFPALHTCQGTLNMHGCLKLTSVHCACA
SQLHHAIHPA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatgcaaggtggtaaattgatggagtttgggggtgggagaagggttaagaga
gagtggcaggacattcaaactgaactgttgatgaagatcgtgtctttgttggatgatcgg
acggtgatcgttgcatcaggagtttgtagtggatggagaaatgctatttgcagtgaactt
actcatctttcactctcttgttgtattatcgtttcctattatgtcgtctcggttgcattt
atgaactttggccctcatgtaaggtgcacaaacaacatgaacaacttggtgctttctatt
gttccaaacttcacaaatctaagggttttgacctttcggaaaaagggtgaacaaccgctg
cttgatgataaatcagtcgagaccattgctaataactgtcatgaattagaggatcttgac
ctcagcatgaactctagacttggtgatcggtccctttatgctttggcccgtggttgtccc
aacctaactaaccttaatatcagttgctgctcagcttttagtgagcatggtcttgacttt
cttagtcgttactgtagaaagttgaagatgttgaacctttttgggtgttataaagcggcg
accaataaggccctgaaggctattggagacaactgtcgacaacttgagtcgataaatctt
ggtcggtgctatgaagttggagatgctggagtgaagaatttagcttatgggtgtcctcat
ctcagtgttattgacttgtctgagtgtttctttataacagatgagagtgtgatagctttg
gcaaacaattgcttgcatctgaggtctcttaatctatactactgtataagaatcacagat
cgggcaatgtatgctttggcccatagccgagtaaaaaacaaagatgaaatattatgggaa
tcagttaaaagtcaatacgaggaagaaggtctcatgaacctcaacatcagtcaatgcaag
gatctaacaccacctgctgttcatgcaatctgtgattcgtttcccgcacttcatacgtgc
caaggtactctcaacatgcatggctgcttgaagttaacctcagtccactgcgcatgtgcc
tctcaactgcatcatgccattcaccccgcttag
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