Helianthus annuus (common sunflower): 110936669
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Entry
110936669 CDS
T05101
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110936669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110936669
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110936669
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Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box
LRR_NXF1-5
F-box-like
Motif
Other DBs
NCBI-GeneID:
110936669
NCBI-ProteinID:
XP_022034776
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Position
4:complement(59054518..59056690)
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AA seq
348 aa
AA seq
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MEGEKLMESGAGESRVKREWEEIQLELLMKIVSFMDDRTVIVASGICSRWRNVICSELTR
ISLSWCTNNMNKLVLSLAPKLTKLRGLTLRQKFEPLLDDDTVETIANNCHDLEDLDLSRN
SKLGDPSLSALARGWPNLTKLNISDCSGFSDDGLEFVSSRCRKLKILNLSGCGKAVTHKA
LKAIGDNCRQLESINLGKCPRVDDAGVMSLVYGCPDLHVVDLDHCFEITDESVIALANNC
LHLRSLNLYGCENITDRAMYALAHSRVKNKDEVFWEPVKTRGEKEGLMNLNISFCKAVTP
HAVQALCRSFPALHTCSRRPSLIMHGCKKLTSVHCACASQLHRAVRPA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgagaaattgatggagtctggagcaggtgagagtagggtaaagagagagtgg
gaggagattcaattggaacttttgatgaagatcgtgtctttcatggatgatcggacggtg
atcgttgcttctggtatttgtagtagatggagaaatgttatttgcagtgaacttactcgt
atttcactctcttggtgcacaaataacatgaacaagttggtgctttctcttgctccaaag
ctcacaaaactaaggggtttgacccttcggcaaaagtttgaaccgctgcttgatgatgat
acagtcgagaccattgctaataactgtcatgatttggaggatcttgacctcagcaggaac
tctaaacttggtgatccgtccctttctgctttggcccgtggctggccaaacttaactaag
ctcaacatcagtgactgctctggttttagcgatgatggtctcgagtttgttagtagtcgc
tgtagaaagttgaagattttgaacctttctgggtgtgggaaagcggtgacccacaaggcc
ttgaaggctattggagacaactgtcgacaacttgagtcgataaatcttggtaagtgtccg
cgagttgatgatgctggcgtgatgagtttagtttacgggtgtcctgatctccatgttgtt
gacttggatcactgtttcgagataacagatgagagtgtgatagctttggcaaacaattgc
ttacatctgaggtctcttaatctatacggctgtgaaaatatcacggatcgggcaatgtac
gctttggcccatagccgagtaaaaaacaaagatgaagtattttgggaaccagttaaaacc
cgaggcgagaaagaaggcctcatgaacctcaacatcagtttctgcaaggctgtaacacca
cacgcggttcaagctctctgtcgttcgtttcctgcacttcatacgtgctcaagaaggcct
tctctcatcatgcatggctgcaagaagttaacctcggtccactgcgcgtgtgcttctcaa
ctgcatcgtgccgttcgccccgcttag
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