Helianthus annuus (common sunflower): 110937502
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Entry
110937502 CDS
T05101
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110937502
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110937502
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110937502
Membrane trafficking [BR:
han04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110937502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Motif
Other DBs
NCBI-GeneID:
110937502
NCBI-ProteinID:
XP_022035622
LinkDB
All DBs
Position
4:185537553..185549288
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AA seq
968 aa
AA seq
DB search
MDPKPPLRSTNSTANRHNSSTSSLLSKSLSDASTQSLSSILNNPHLSDGSWSGWWSSSTA
AVQIPEFAPPVNKTLGFEITRSDFTRYVSSISDHYNRFEDIRNHSNKENRDEDAINSHER
AGEALVACLREVPALYFKEDFALEDGATFRAASTFSTVAENAVLQEKLSQYLDVVEVHLV
KEISLRSNSFFEAQSQLEDLSLKIVEGCGRIRELKETIRLLDVDLVDSARQVQDLNLTRS
NLLALQEKLRLILYVNQSLAALKLLVASADCAGALDVTDDLKNFLDADQLTGLHCFRHLE
DHVAAAIDSVNSILSAEFLRVSINDAGDKDAEILSKAKARIASPGNGEDNEVYLQQEEDT
SSFHDRLLPLIIGLLRTAKLPTVLRVYRDTVTSNMKTVIKSVVAELLPVLLARPLDSDFK
PGDRIVDADGGGSSLASKLRSMSSESFVQLLGTIFKIVQAHLHRAAEVKKAIEWIMSNLD
GHYAADSVAAAIAHGALTAEMDSVADTQSGSFPISSQKNVIKVSPATTTSNLSKNFRADV
LRENTEAVFAACDAAHGRWAKLLGVRAILHPRLRLTDFLNIYNVSQEFVTATEKIGGRLG
YSIRGTLQSQTKAFVDFQHESRMTKLKAVLDQETWVEVDVPVEFQAIVDSLFSLEDDNSK
SIANSYNEMVASSEEQPSQSVDGITENNSKTKDAHGKSSIHLISFRGVDYHMVNCGLILL
KMLSEYIEMNTVLPSLSSEVIHRVLEMLKFFNTRACQLVLGAGAMQVSGLKSITSKHLAL
TSQVVSFVHAIIPEIRRILFLKVPEARKGLLSSEIERVSQDYKVHRDEIHTKLVQIMRER
LLVHLRGLPQIIETWSRVDETDVQPSQFARSLTKEVGYLQRVLSRTLHEADVQEIFKEVT
IIFDIQISDAFSHVDISIPQAKARLNRDIEHILGCIKSLPSAKLNEPGTPVAPRLESLVQ
RISAEPDQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagcctcccctccgatcaacaaactccactgcaaaccgccacaattcatcc
acttcatcgttgttatccaaatcactctcagatgcaagcactcaaagcttatcttcaatc
ctcaacaatccacatctctccgatggatcctggtccggctggtggtcatcatcaactgcc
gccgtacaaattcctgaattcgctcctcctgttaacaaaaccctagggtttgaaatcacc
agatctgatttcacacggtatgtatcttcaatttccgatcattataaccgtttcgaagat
attaggaaccattcgaacaaggagaacagggatgaggatgcgattaatagtcatgagagg
gcaggggaagctctggtggcgtgtttgcgagaagttccggccttgtattttaaggaggat
tttgcgcttgaagatggagcgacttttagggctgcatccacgttttctaccgttgcggag
aatgcagtgttgcaggagaagttgtcgcagtatttggatgtggtggaggtgcatttggtt
aaggagatttcattgcggtcgaattcgtttttcgaggcgcagagtcagttggaggatttg
agtttgaagattgtggaagggtgtggtaggatccgggagttgaaggagacgattcggctt
ttggatgtggatttggtggattcggctcggcaagttcaggatctgaatcttactaggagt
aatttgctggcattgcaggagaagcttaggcttatattatatgttaaccagtctcttgct
gctcttaagttgcttgtcgcatctgctgattgtgctggagccttagacgtcactgatgat
ttgaagaattttctggatgccgatcaactgactgggctacattgttttcgtcacctcgag
gatcacgtagctgctgccatagattctgtaaatagcattctttcagcagagtttttgcgt
gtgtctattaatgatgctggagataaagatgcggaaatattatctaaagcaaaagcaagg
atagcgtcaccaggaaatggagaagataatgaagtatacttgcaacaagaagaagatacc
tctagtttccatgaccgacttttacctctaattataggcttacttagaactgcaaaactt
ccaactgtgctgagagtatatcgtgatacagttacatctaatatgaaaactgttatcaag
tcagttgttgcagagctgcttccagttcttcttgccagacctttggactctgattttaag
ccaggcgatcgaattgttgatgcagatggtggaggttcatcactcgcaagtaagttaaga
agcatgtcttctgaaagctttgttcaacttcttgggactattttcaagattgtacaggca
cacttacatcgagctgctgaagttaaaaaagccattgagtggataatgtcgaatcttgac
ggtcactatgctgctgattcagttgctgctgcaattgctcacggtgctttgactgcagaa
atggattcagtggctgatacccaatccggatcatttcctatttcatctcagaaaaacgtt
atcaaggtttctcctgccactactacatcaaatctgtcaaaaaatttcagagctgatgta
ttgagagaaaacacagaagcagtgtttgctgcgtgtgatgcagcgcatggaagatgggca
aagctgcttggtgttcgtgctattctccatccaaggctgaggctaactgattttttaaac
atatataacgtgtcgcaggaatttgtaacagctacagagaagattggtggaaggttggga
tatagcattcgtggaacattacagtctcaaaccaaagcttttgttgatttccagcatgaa
tctaggatgacaaaactgaaagcagtgcttgatcaagaaacatgggttgaagttgatgtt
cctgttgaattccaggcgattgtagattcactttttagcttagaggatgacaattctaaa
agcattgctaatagctataacgaaatggttgccagcagtgaagaacagccatctcagtct
gttgatggaatcacagagaacaacagtaaaacaaaggatgcacatggaaaatcttctatt
catttaatttcctttagaggtgttgactaccacatggtaaactgtggcttaatcttgctg
aagatgttatcagagtacattgaaatgaatactgttttgccatcactttcttctgaggtt
attcaccgtgtgcttgaaatgctgaaatttttcaacacaagggcttgtcagcttgtcctt
ggtgctggtgccatgcaggtctctggtttaaagtccattacatccaaacatttggccctg
acaagtcaggttgtcagctttgtgcatgctattatccctgaaatcaggaggattcttttc
ctgaaggtaccggaggcgcgaaaaggattgctgtcatcagaaatcgaacgagtatcacag
gattataaagtgcatcgagatgaaatacatacaaaactggtgcaaataatgagggaaagg
ttgttggttcatcttcgtggattgccacaaattattgaaacatggagccgagtagatgaa
acagatgtacaacctagtcagtttgctagatcactcacgaaggaagttggatatcttcaa
cgtgtgctttctcggactttgcatgaggcagatgttcaagaaatattcaaagaagtgacc
atcatctttgacatacaaatctctgacgcattttcacatgtggatattagcattccacaa
gccaaagccaggcttaatcgtgatattgagcatattcttggatgcattaaatcgctgcct
tctgccaagttaaacgagcctgggactcccgttgctccacgacttgagtccttagtccaa
agaatatctgctgaaccggatcaatag
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