Helianthus annuus (common sunflower): 110937565
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Entry
110937565 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110937565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110937565
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110937565
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110937565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
zf-RING_4
DZR
Motif
Other DBs
NCBI-GeneID:
110937565
NCBI-ProteinID:
XP_022035695
LinkDB
All DBs
Position
4:187469351..187472557
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AA seq
331 aa
AA seq
DB search
MDIDNIECVSTSNGLDDEIPYHHHNINHHHHNHNHPNIPQNPHPKSHNVNVVPSTINPTT
SVHELLECPVCTNSMYPPIHQCHNGHTICSTCKTRVHNRCPTCRQELGDIRCLALEKVAE
SLEFPCKYTSLGCTGIFPYYSKLKHEAICNFRPYICPYAGSECSVEGDIPYLVSHLRDDH
KVDMHSGYTFNHRYVKSNPREVENATWMLTVFNCYGQYFCLHFEAFQLSMAPVYMAFLRF
MGDENDARNYRYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGE
KKELKLRVTGRIWKEPPNADGSNVYIPNLCS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggatattgacaacatcgaatgtgtttcaacctctaatggattagatgatgaaatccca
tatcaccatcataatattaatcatcaccatcataatcataatcacccaaacattccccaa
aatccgcatccgaaaagtcataatgttaatgttgttccttcaactattaatcccacaacc
agtgttcatgagcttcttgaatgccctgtttgtaccaactcaatgtaccctccaattcat
cagtgtcacaacgggcacacgatttgttccacttgtaagacacgggtccacaacaggtgc
ccaacgtgccgtcaagaacttggggacataaggtgccttgctttggaaaaagttgccgaa
tcactcgagtttccttgcaaatatacctctcttgggtgcactgggatcttcccgtactat
agcaagctgaaacatgaggccatctgcaattttaggccgtacatttgtccatatgctgga
tcagaatgctcggttgaaggggatatcccgtatctagtttcccacttgagggatgatcac
aaagtggatatgcactctgggtacactttcaatcaccgttatgtcaagtccaatccacgc
gaagttgaaaatgccacgtggatgcttacggtcttcaactgctacgggcagtatttttgt
ctccacttcgaggcgttccagcttagcatggctcccgtatacatggcatttctccggttc
atgggtgacgaaaacgatgcccgtaactaccgttacagtttggaggttggtgggaatggc
agaaaactcatatgggagggcacccctcggagcatacgagacgggcacagaaaagttcgc
gacagccatgacgggctcataatacagaggaatatggctctctttttctctggcggagaa
aaaaaagaactcaagttacgtgtcacgggtcggatatggaaagaaccgcctaacgctgat
ggtagtaatgtttacattccgaacctgtgtagttaa
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