Helianthus annuus (common sunflower): 110937640
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Entry
110937640 CDS
T05101
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110937640
Membrane trafficking [BR:
han04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
110937640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
110937640
NCBI-ProteinID:
XP_022035784
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All DBs
Position
4:complement(190730567..190743994)
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AA seq
1110 aa
AA seq
DB search
MYMAYGWPQVIPLESGLCPTSQQIIYLKVVDRLLLVVCPSHFELWSSSQHRVRLGKYKRD
PDSIAREGENLQAIWSPDTKLIAVMTSSFFLHIFKVQFSEKKLHIGGKQPSNLSLATISL
LMSEEVPFSGKDLALSNIICDNKNLLVGLSNGTLYNMSWKGEFNGSLDLDFNSYNENGHT
KLSNGVASGGTQGVISSSHSSYKKPAITYLYFSFPLRLLFVLFSDGQLVLCSVSKRGLKQ
PDSVKPEYRLGSDDAVCASVSPDQQILAVGTRRGVVELYEISEPVALIRSVSLHDWGYSM
DDTGAVSSIAWTPDSSAFAVGWKLRGLTVWSISGCRLMSTIRQIGINSASAPVVKQNQDG
NYEPLMSGTSFMQWDEYGYRLYAIEAGSSERILAFSFGKCCLNRGVSGKTHVRQVIYGED
RLLVVQSEDTDELKLTHLNLPVSYISQNWPVLHVAASEDGMYLAVAGLHGLILYDIRLSR
WRFFGDVTQEQKIQCTGLLWMGKIVVVCNYIESSNTYELLFYPRYHLDQSSLLYQKPLLA
KPMVMDVYNDYLLVTYHPFDVHIYHVKVSGDLTPSSNPDIQLSTVRELSIMTAKCHPAAM
HFIPDQHESDASIKDASSSPNSLEKEPIRCLILRANGELSLLDLIDGRERELTDSIELFW
VTCGRSVTTNLIEEVSWLDYGHRGMQVWYPSSGVDPYKQEEFLQLDPELEFDREVYPLGL
LPNAGIVVGITQRLSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALQLARLSEE
KPHFSHCLEWLLFTVFETEISRQNVNKDNPSLLEKTCDLIKHFSEYFDVVVSVARKTDGR
HWADLFSAAGRSTELFEECFQRRWYQTAACYILVIAKLEGAPVSQYCALRLLQATLDESL
YELAGELVRFLLRSGREYEPATTDSDKLSPRFLGYFLFPTSYRRQSSEPKSPSFKEQNAH
VASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQREKFGSARLENFASGLQLIS
QKLQMGTLQSRLDAEFLLSHMCSVKFKEWIVVLATLLRRSEVLIDLFRHDMRLWQAYSAT
LQSHPSFSEYHDLLGDLGEKLSSNEITEET
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtacggctggcctcaggtgatccctctggaatcaggcctgtgtcctact
tcgcagcagatcatctacctcaaagttgtcgatcgattattgctcgttgtttgtccttct
cattttgagctatggagctcttctcagcatagggtaagattagggaagtacaagagagat
ccggattcaatagcaagagagggagagaacttgcaggctatctggagccctgatactaaa
ttaatcgctgttatgacatcttcattctttcttcacatttttaaagtccaattttctgag
aaaaaattacacataggaggcaagcaaccgtccaatctgtctcttgctactatttctcta
cttatgagcgaggaggtccctttttcaggcaaggatttagcgttgagcaatatcatttgc
gacaacaaaaacttgctggttggactctctaacggaactttgtataatatgtcttggaag
ggtgagtttaatggatccttggatctggacttcaattcatataatgaaaatggccataca
aaattgtccaatggtgtagcttctggagggactcaaggtgttatatcatctagtcattct
tcgtataaaaagccagcaatcacttatttgtactttagctttccgttgaggctgttattt
gttctattctctgatggacagttggtgttatgttctgttagtaaaagaggtttaaagcaa
ccagattctgttaaacctgaatatcggttaggatctgatgatgcagtatgtgcttcagtt
tcaccagaccaacaaatccttgccgttggcaccagaagaggtgtcgtagagttgtatgaa
attagtgaacctgtagcacttattcggtccgtatcattacatgactggggatattcaatg
gatgacactggtgcggttagttctattgcatggacccccgatagctctgcttttgcagtt
gggtggaagttaagaggacttacggtgtggtctatatccggttgtcgattaatgtctaca
atacgtcagattggtataaattctgcatctgctccagtggttaagcaaaaccaagatggc
aattatgaaccgttgatgagtggcacttcatttatgcagtgggatgaatatggttataga
ctttatgcaattgaagcaggttcttcagaaagaatacttgcattctctttcggaaaatgt
tgtctaaacagaggggtttctggcaaaactcatgtccgtcaagttatatatggtgaagat
cggttacttgttgtgcagtctgaggatacagatgaactgaaattaacacatcttaacctt
ccagtttcctatatctcccaaaattggcctgttcttcatgtggcagctagtgaggatgga
atgtatttagccgttgctggtcttcatgggttgattttatatgacattcgattaagtaga
tggaggttttttggtgatgttactcaggaacaaaagattcaatgcacaggattattatgg
atggggaaaatcgttgttgtttgcaactacatcgagtcatccaacacgtatgagttgctg
ttctacccaagatatcatcttgatcagagctcacttctttatcagaaaccgttgcttgca
aaacccatggtgatggatgtctataacgactatttacttgtcacttaccacccatttgat
gtgcatatatatcatgtaaaagtatctggtgacttgactccttccagtaatccggatata
cagctttctacagtacgagagctatccatcatgactgcaaaatgccatcctgctgcaatg
cattttataccagatcaacatgaaagtgatgcttccattaaagatgcttcatcatctcca
aattcattagaaaaagagcccattagatgtttaatactaagagcaaatggggaactatca
ttacttgatttaattgatggtcgagaaagggagcttacagattctatagagttgttttgg
gttacctgtgggcggtcagtgacgacaaatttgattgaggaagtatcatggttagactac
ggtcatcggggaatgcaggtttggtatccatcttcaggtgtggacccctataagcaggaa
gaattcttgcagttggaccctgagcttgaatttgatcgtgaggtgtatccacttggtctg
cttccaaatgctggaattgtagttggcattacccaaagactatcgttttctgcatgcaca
gagtttccatgtttcgagccatctcctcaagctcaaacaatactacattgtctacttcgc
catcttcttcagagagataagagtgaagaggctttacaactggctcgattgtctgaggag
aagcctcatttttcccattgcttagagtggcttctttttaccgtctttgaaaccgaaatt
tccaggcaaaatgtgaacaaagacaacccttctcttttggagaaaacttgtgatttgata
aagcacttttcagagtattttgatgttgtggttagtgtggcaagaaagacagatggccgt
cactgggcagatttgttttctgctgctggaagatcaacagagttgtttgaagaatgcttc
cagaggagatggtatcaaaccgctgcttgttatatacttgttatagcaaaactggaagga
gcacctgtcagtcagtactgcgctctacgcttattacaggcaacactggatgaatcttta
tacgaacttgctggggagctggtgagatttttgttgagatcaggaagggaatatgaaccc
gcaactacagattcagataaactatctcccagatttctaggatatttcctttttcctact
agttataggagacagtcttcagagccaaaaagcccttcattcaaagagcagaatgcacat
gttgcttctgtaaagaatattctagaaagtcatgctagctacttgatgtctgggaaagaa
ctttccaagcttgttgcatttgttaaaggcacacagtttgatctagtggaatatcttcaa
cgcgaaaaatttggaagcgctcgtttggagaattttgcttctgggctccagttaataagt
cagaagcttcaaatgggaactttgcaaagccgattggatgcagaattcctcttgtcccac
atgtgctcagtcaagtttaaagagtggattgtagttttggcaacccttttaaggcgatca
gaggttctcattgatttatttcgccatgatatgcggctctggcaagcatacagcgcaaca
ttgcagtcacatccatcattttctgaataccatgatttactcggagacttgggagagaaa
ctttcatccaatgaaataacagaagagacctga
DBGET
integrated database retrieval system
