Helianthus annuus (common sunflower): 110937810
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Entry
110937810 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110937810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110937810
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110937810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
ATG17_like
DUF724
Motif
Other DBs
NCBI-GeneID:
110937810
NCBI-ProteinID:
XP_022035961
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Position
4:197168716..197173586
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AA seq
363 aa
AA seq
DB search
MADFSFNTNPSTFSFVSSSSSSSSSSTNTAFGSSSTKTTTQHTSSSTLGFSSSSFSFGNV
TTSSSVTSPTTTPSPAVASTGTSTSFSFQTSSTTLATLALSSQPLSTPSASLLSTTASTT
TTSTATATTAQTSSPLVVSSSSGTTTSVSTTAVSAPKIPSEITGKTVEEIIKEWNVELQE
QTSKFRKLANAIAEWDKRILNNRDVLLKLEAEVAKVVETQSNLERQLELIETHQQEADKS
LRSVEEEAERIYKDEHGLLLDDEAASTRDTMYEQAEFIEREMEQMTEQIKSVIQKLNANQ
GGELETTDGMSPVDVVVRILNNQLSSLVWIDEKAEEFSSHIQNLAKKGTTADQALMGLKF
WLS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttctcctttaacacaaatccttcaaccttttcattcgtctcgtcttcatct
tcatcttcatcgtcttcaaccaatactgcatttggatcatcatctactaaaacaacaact
caacacacttcatcttccaccctagggttttcatcttctagcttctcgtttggcaatgta
acaacctcctcttctgtaacttcacctactactacaccttcaccagccgttgcttctact
ggaacatcaacttctttttcatttcaaacatcctctacaactctagctactcttgcacta
tcgtcacaaccgctatcaacaccttcagcgtctttgttaagcaccactgcttccacaact
acaacctcaactgctacagccactactgctcaaacatcgtctcctcttgttgtatcttcc
agtagtgggacaactacaagtgtcagcacaactgcagtctctgctccaaagataccatcg
gaaattactggaaagaccgtggaggagatcattaaggagtggaatgttgagctccaggag
caaactagcaagttcaggaagctagctaacgcaatagctgaatgggacaaaagaatcttg
aacaaccgggatgttcttcttaaacttgaggcagaagttgcaaaagttgttgagacccaa
tcaaaccttgagagacagctggagctgattgagacacatcaacaagaggctgataagtcg
ttacgaagtgtggaagaagaagctgagcgaatatacaaagacgagcatggtctgcttctt
gatgatgaagcagcttcaaccagagatacaatgtacgagcaggctgaattcattgagaga
gaaatggaacagatgactgaacagattaaatctgtaattcagaaacttaatgccaatcag
ggtggagagcttgaaacgactgatggtatgtccccagtggatgttgttgttcggatcctt
aacaatcaactaagctcattagtatggatcgatgaaaaggctgaagaattctcttcacat
atccagaatctggctaagaaaggtactactgctgatcaagcattaatgggcctaaagttt
tggttgtcttga
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