Helianthus annuus (common sunflower): 110937867
Help
Entry
110937867 CDS
T05101
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03020
RNA polymerase
han03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110937867
09124 Replication and repair
03420 Nucleotide excision repair
110937867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110937867
03400 DNA repair and recombination proteins [BR:
han03400
]
110937867
Enzymes [BR:
han01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110937867
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110937867
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110937867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110937867
NCBI-ProteinID:
XP_022036008
LinkDB
All DBs
Position
4:complement(199891128..199898994)
Genome browser
AA seq
1190 aa
AA seq
DB search
MDLEEEYDQGYDDEEEDITQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
APLYVDVSKRAIKKGHDGEEVTETQDFAKVFIGKVPIMLRSSYCTLFQNSEKDLTELGEC
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMF
VRMLARTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMM
ELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGVGEYCE
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY
VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY
PILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRDPDMLVRTLRRLRRRVDVNTE
VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIQKLQLRETPEDGGWHDLVSN
GFIEYIDTEEEETTMISMTISDLVSARLNPDESYSDTYTHCEIHPSLILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA
NTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDDATQGQASRYTRKDHSTSL
RHSENGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW
TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHK
CGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC
RGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDSKKKGA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaagaatatgaccaaggatacgacgacgaggaagaagatataactcaa
gaggatgcttgggcagttatcagttcttatttcgaagagaaaggtctcgttcgtcaacaa
ctcgattcgttcgatgagtttattcagaacactatgcaggaaattgttgacgagtctgcg
gatatcgagatccgacccgaatctcagcacaatccgggtcaccagcctgattttgcagag
actatctataaaatcagcttcggtcagatttatctgagtaaaccgatgatgacggaatca
gatggtgaaaccgccacgttgtttccaaaggcagcaaggctgagaaatctaacatattct
gcaccattatatgttgatgtatcaaaaagggctataaagaaagggcatgatggtgaagaa
gtcacagaaactcaggattttgctaaagttttcatcggaaaggttcctataatgctacgt
tcaagttactgtacattatttcagaattctgaaaaggatttgaccgagcttggagagtgc
ccttatgatcaaggtggatatttcatcataaacgggagtgaaaaagttctaatcgctcaa
gagaaaatgagcaccaatcatgtttacgtgtttaaaaagagacaaccgaacaaatacgct
tatgtggcggaagttcgttcaatggcagaatctcagaacaggccacctagtaccatgttt
gttcgaatgcttgctcggaccagtgccaaagggggctcttcaggtcaatatattcgggct
acacttccatacattcgaactgagattcctatcattattgtgtttcgagcattgggattt
gttgctgataaagatattttagaacacatatgttatgattttgctgatactcaaatgatg
gagttgctgcggccttcattagaagaagcatttgttatacaaaatcaacaggtggcattg
gattacattggtaaaagaggtgctactgttggtgtcactaaagagaagagaattaagtat
gcccgtgatattcttcaaaaagaaatgcttcctcatgtgggggttggagagtattgtgaa
acaaaaaaagcttactactttggatatatcatccaccgtctactgttatgtgctcttggt
cggagggccgaagatgacagagatcattatggcaataagaggcttgatcttgccggtcct
ttgctaggtggcttatttagaatgctcttccgaaagttaacaagagatgtaagaggttat
gtacaaaagtgtgtagacaacgggaaggatgttaatctacaatttgcaattaaagcaaaa
acgattactagtggccttaaatattcccttgctactgggaactgggggcaagcgaacgca
gctggaacgagagctggtgtttcacaggtgttgaatcgtttgacatatgcatctacgctg
tcacatttaagaagactaaactctcctattgggcgtgaaggaaaattggcaaaaccgaga
cagctgcacaactcacaatggggaatgatgtgccctgcagaaacccctgaaggacaggca
tgtgggttggtgaaaaatcttgctttgatggtttacattactgttgggtcagcggcatac
ccaattctggaatttttggaagaatggggtacagaaaatttcgaggaaatttctcctgct
gttatcccgcaagctacaaaaatctttgtcaatggtctgtgggtgggaatccaccgtgat
cccgacatgttggttaggactctgaggagattaagaagacgggttgatgtgaacactgaa
gttggagttgttcgagatattcgtttgaaagagcttcgcatctacaccgattatggccgt
tgcagtcgtccactttttattgtagagaagcaaaggcttttaataaaaaagagagacatc
caaaagttgcaactaagggaaaccccagaagatggtggttggcatgatcttgtctcaaat
ggattcatcgagtatattgataccgaagaggaagagacaactatgatttccatgaccatc
agtgatctcgtgagtgcgaggctaaatccagacgagtcttattcggacacttatacacat
tgtgaaattcatccatcattgatcttgggtgtttgtgcctccattataccatttcccgac
cacaatcagtccccacgtaatacatatcagtcagccatgggtaaacaagctatggggatt
tacgtcaccaacttccaatttcgtatggatacattggcatatgttctttactatcctcaa
aaaccacttgtgactactcgagcaatggaacacttgcatttcagacaacttccagctggc
ataaatgcaattgtggcgatttcctgttattctggatataaccaagaagattcggttatt
atgaaccaatcatccattgaccgtggtttcttcagatcactcttcttccgttcatacagg
gatgaagaaaagaagatggggacacttgtaaaagaagattttggtcggcccgacagagct
aataccatgggtatgaggcatggttcatatgataaattggatgatgatggtctagctcct
cctggaacacgagttggaggtgaagatgtgataattggaaaaacaacacctattgctcag
gatgatgctactcagggtcaagcctcacgttacactcgtaaagatcacagcacaagctta
cgtcacagtgaaaatggaatggttgatcaggtactgctgactaccaatgctgatgggtta
aggtttgttaaagtgcgggttagatccgttagaatacctcaaatcggagataagtttagt
agtagacatggtcagaaaggaactgtgggtatgacttacacacaagaagacatgccatgg
acggttgaaggtatcactcccgatattatagtcaacccacatgctatcccgtcacgtatg
accatcggtcagcttatcgagtgtattatggggaaggttgctgctcatatgggcaaagaa
ggagatgccactcctttcacagatgttacggtggataatattagtagggcgctgcacaag
tgtggttaccagatgcgtgggtttgagaccatgtataacggtcacacgggtcggcggctt
ccagctatgatattcttggggccaacttactaccaaagattgaaacatatggtggatgat
aagatccattcacgtggtaggggtccggttcagatcttgactcgacagccggctgaggga
cggtcacgtgacggtgggcttaggtttggtgaaatggaacgggactgcatgattgctcat
ggtgctgctcattttcttaaggaacgactgtttgaccagagtgatgcgtacagggttcat
gtttgcgagcgttgtgggttgatcgcgattgctaatcttaaaaagaattcgttcgagtgc
agaggatgcaagaacaagactgatattgttcaggtgcatattccgtacgcatgtaaactg
ttgttccaggagcttatgtccatggcaattgcgcctcgaatgctcactaaagacatcaaa
caagctaaagacagcaagaagaaaggcgcatag
DBGET
integrated database retrieval system
