Helianthus annuus (common sunflower): 110938003
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Entry
110938003 CDS
T05101
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110938003
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
110938003
Transfer RNA biogenesis [BR:
han03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
110938003
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
DivIVA
Motif
Other DBs
NCBI-GeneID:
110938003
NCBI-ProteinID:
XP_022036163
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Position
4:complement(202563739..202572026)
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AA seq
795 aa
AA seq
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MVVRTVNSISLFRSTTPPSQLPLTAFRRYHQIRAFNYLHFSRFPVSKPTLFSYRNLKTGG
CRSYSVQSFVDSVIEEFEALRRRRIRASNKSVLTSNKELVDDKLRKQVLQKGLLLEFKKD
SERILLAVAQKPDGRRNWIVSDQNGVTTSIKPQQITYIVPGVDNFNTTEISDFNQRAQNN
LDPTLLEFAWLELLEGNKSVTVEELAEMIFGSADPLECYCAHLLLSRDEVYFTRLDSKGS
SSVYGPRPTVQVEEIKRRVIAKEAADKDLEEFVQLLRSAKAMPPRGKPSKCSWKAEDKIW
HKIESLEAFAIDACKDDVQKNTAGVILKAMGLSKTAGSAVNLLTDIGYFPVHVNLDLLKF
NIRTSYPDHILSAAENILQESHDPDKDDRIDLTHLKVYAIDVDEADELDDALSATKLHDG
RIKVWIHVADPASFVKPGSLIDREALQRGTSVFLPTATYPMFPEKLAMQGMSLKQGTICR
AVTVSVVLHSDGSIAEYSVNNSIIKPTYMLTYESASELLNLNLEEELELRILAEAARLRL
QWRRGQGAIETGSLEPRIKVENPDDPEPSIRLYVEDQTDPAMRLVSEMMILCGEAIATFG
SANKIPLPYRGQPQSKIDTSAFNHLPEGPVRSSAIVKLMRAAEMDYRKAIRHGILGIPGY
VQFTSPIRRYMDLLAHYQVKAFLKGDVLPFTSGQMEGMAASVNMNARIAKKLFSSSLRYW
ILEYLRRQPKQRKFRALILKFLKDRNASLLLLEVGFQATAWVSVGSHVGDEVEVRVEEAH
PRDDIISFKEVVQVT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggtggtccgaacggtgaattcaatttcacttttccgctccaccacgccaccgtcacag
ctgccgttaaccgccttccgccgctaccaccaaattcgagctttcaactacctccacttc
tcccgttttccggtttctaaaccgacgctgttcagttatcgtaacctaaaaaccggtggc
tgtcggagctattccgttcaaagtttcgtcgattccgttattgaagagtttgaagcgtta
cgccgccggagaattcgcgccagtaacaaatcagttctaacaagcaacaaggagcttgtt
gatgataaattgaggaagcaagtactgcagaaaggattgctgctagagtttaaaaaagat
tctgagagaatcttgcttgctgtagctcagaaacctgatggaagaaggaattggatagtc
tcagatcagaatggtgttacaacttccattaaacctcagcaaatcacttatatagttcca
ggggttgataatttcaacaccacagagatatcagacttcaatcagagagctcagaataac
ttggatcccacgcttctagaatttgcgtggcttgagcttcttgaagggaacaagtcggta
actgttgaagaattggctgagatgatctttggcagtgcggatcctctcgaatgctattgt
gcacatctattactatcaagagatgaggtttacttcacaaggcttgatagcaaaggctct
tcttctgtttatggtcctcgtccaactgttcaggtagaagaaattaagcgaagagtgatt
gccaaggaggcagctgataaggatttggaagagtttgtacagttgttaagatctgcaaaa
gcaatgcctccacgtggcaaaccgtctaaatgttcctggaaagctgaagataaaatttgg
cacaaaattgaatctctggaggcttttgctatagatgcttgtaaagatgatgtgcaaaag
aatactgctggagtgattctgaaggcgatggggttatcaaagacagctggttcagcagtt
aatcttctcacagatattgggtatttcccagtacatgtcaatcttgatctcctgaagttc
aacatacgtaccagttatccagatcatattttgtcagctgctgaaaatattctgcaagaa
tcgcatgatccagacaaggacgataggatagatctgacacatctgaaggtatatgcaatt
gatgtggatgaagcagatgagcttgatgatgcattaagtgcaacaaagctgcatgatggg
cgtattaaagtttggatacatgttgctgatccagctagctttgttaagccaggcagcctg
atagacagagaagcattgcaaagaggaacatctgttttcttaccaactgccacttatccg
atgttccctgagaaacttgccatgcaaggcatgagcttgaagcaaggaacaatttgcagg
gcggttacagtttcagttgtattgcattctgatggcagcattgcggaatattcagtgaat
aattcaattattaaaccaacttatatgttaacatacgagagtgcatctgagcttcttaat
ctgaatttggaagaagagttggaactgaggattcttgccgaggccgcacgtcttcggctt
cagtggcgacgtggacagggtgcgattgagaccggatcattagaacctagaataaaggtg
gaaaatccagacgatccagaaccgtcaattaggttatacgttgaagaccaaacagatccc
gctatgcgacttgtatctgagatgatgatactatgtggggaagctatagccacatttggt
tcagctaacaagattcctttaccatacagaggacaaccccagtccaaaattgacacgtca
gcatttaatcatcttccggaaggtccagtccgaagctctgctattgtaaaacttatgcgt
gctgctgaaatggattacagaaaagctatacgccatggtattcttgggattcctggttat
gttcagtttacatctcccattcgcagatatatggacctccttgctcattaccaggtgaag
gcttttcttaaaggcgatgttcttccgtttacatctgggcaaatggaaggaatggctgca
tctgtgaacatgaatgctaggatagcaaagaagctatttagtagcagcttacggtattgg
atattagaatatttgagaaggcaaccaaaacagagaaaattccgcgcgttgatccttaaa
ttcctcaaagaccgcaatgcgtcgttactacttttggaggttggatttcaagcaactgca
tgggtgtcagtcggatcacatgtcggcgatgaagtggaggttcgggttgaagaagctcac
ccgcgcgatgacatcatatcattcaaagaagttgtacaagttacatga
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