KEGG   Helianthus annuus (common sunflower): 110938026
Entry
110938026         CDS       T05101                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:han04812]
    110938026
Cytoskeleton proteins [BR:han04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110938026
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_VPS8 WD_LRWD1 ERbeta_N Beta-prop_WDR75_2nd WDR54
Other DBs
NCBI-GeneID: 110938026
NCBI-ProteinID: XP_022036191
LinkDB
Position
4:complement(202199852..202210004)
AA seq 949 aa
MAKRGYKLQEFVAHTANVNCLKIGKKTRRNFITGGDDEKVNLWSIGKPTATTSLSGHTSP
IESVAFDSAEVLVAAGASSGVIKLWDLEETKVVRTLNGHRSYCTALEFHPFGEFFASGSM
DTNLKLWDIRKKGCIHTYKGHRRAVSTIRFSPDGRWVVSGGLDNVVKIWDLTAGKLLHEF
KFHEGHIRSMDFHPLEFLLATGSSDKTVKFWDLETFELIGSTRPEATGVRSVTFHPDGRT
LFCGLDGSLKVYSWEPVICHDALDMGWSTLGDLCIDDGKLLGCSYYQNSVAVWVADTSLI
EPHAHSILAEEKTRVQSKLNLQQDVKDRVGSPRRPTVSPDDDTKDIKNIYVDTAGMTPVA
SRKSGSLPTVLNPNPQIHKEIDNAATHKQVPAAKFTASKELTTNEHENTAVSLKPVHRRR
PSTTKLDIEGISITVESGLKSGSDTATLSNFQKRIVADAAVKDSSNDKPSISVTKEIQKA
SSPDTLPQETRDRSDESKKESKPVKYVNGVAVVHGRTRSLVERFEKREKLNTDETQVIDP
AAQVSTDTDVPPKRVNQSYNAAPCVVPEAKSVQMPVKTPDVIASEEPEAKTPNVPVRVNQ
SFNVVPRAIPDAVASEEPEAKTPKTSIRATDDVDNVMPEKTPDVVSNEAKSSPMITKPDV
GPNIKSEEANSPPVRPRTAPSMLLPEKGKVSPMQRSVNSRRVMQERVRPSPMLVTRRSNA
SPRMIPERTTKTSPVVVGPRHDTPSRMMLQKAKSSPSLDDGPQTTGRGLMSKKDDDVADD
LLQNHDVFVSSLRARLTKLQVVRHFWGQNDTKGAINALRKLPDHAPTVFQVQADVVNVLM
ERMESLTLDHFSSLLPVLLDLLDSKTERHISVSLELLLKLVAVFGSVISSTISAPPTVGV
DVHAEKRLERCNECHIQLQKIRKCLPDIIRRGGLPARCAQELNIVLQKS
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggccaaacgcggatataaattgcaggaatttgtggcgcatacagcgaatgtgaattgt
ttgaaaatcgggaagaagacacgtcggaactttattacaggcggtgatgatgagaaagtg
aatctttggtcgattgggaagccaaccgctacaacgagtctaagtggtcacacaagccct
attgagtctgtagcttttgactcggcagaagttttagtagctgctggagcttcttctggt
gtgataaaactttgggatctcgaagaaacaaaggtggttcgtacacttaatggacaccga
tcctattgtactgctcttgaatttcatccttttggtgagttttttgcatcgggttcaatg
gacactaatctaaagctctgggatattagaaagaaagggtgcattcacacatataaagga
catagaagagcagttagtactatcagatttagccccgatggtcgttgggtggtttcaggg
ggacttgataacgttgtaaagatttgggacttaacagccggaaagcttttacatgagttc
aagtttcatgaaggacatattcgatcaatggattttcatcctctcgagtttcttctagca
acaggttcttcagacaaaaccgtgaaattttgggacttggagacctttgaattgattggg
tcaactcgaccggaggcaacaggcgtacgatcagttacatttcatccagatgggaggacc
ctcttttgcgggttagatggcagtttaaaggtatattcatgggagcctgttatttgtcat
gatgctcttgatatggggtggtcaacgttaggtgacctttgcattgacgatggaaagctt
ttaggatgttcgtattatcagaattctgttgcagtttgggtcgcagacacttcgcttatt
gaaccacatgcgcatagcatcttagctgaggaaaaaacccgtgtgcagtcaaaattaaat
ctccaacaagacgtaaaagatagagtcggtagtcccagaaggcccactgtgtcgccagat
gatgacacaaaggatataaagaatatatacgtggacactgcaggtatgacacctgtcgct
tcaagaaaatccgggtctttaccaacggttttgaacccaaacccgcaaattcataaagag
attgataatgcggctacccataaacaagttcctgctgccaaatttaccgcttcaaaagaa
ttaacgaccaatgaacacgaaaacactgcggtatcacttaagcctgttcataggagaagg
ccatcaactaccaaactagatatagaagggatatcaataaccgttgaatctggattaaaa
agcggatcagataccgccaccctttcaaactttcaaaaaaggattgtagcagatgctgct
gttaaagattcttccaatgataaaccttcaatctctgtaacaaaagagatacaaaaggct
tcgtctcctgatacgcttccacaggaaacacgtgacaggtctgatgaatcaaagaaagag
tcgaaacctgttaaatatgttaatggagtggcggttgtgcatggaaggactcgcagtcta
gttgagaggttcgaaaagagagaaaaactgaataccgatgaaactcaagtcattgatcca
gcagctcaagtatcaaccgacacagatgtacctcccaaaagggtaaatcagtcatataat
gctgctccttgtgtagtacctgaagctaaatccgttcagatgccagtaaagacacctgat
gtgattgcgtctgaagaacccgaagctaaaacacccaacgtgcccgtaagggtaaatcag
tcatttaacgtagtccctcgtgcaatacctgatgcggtggcttctgaagaacctgaagct
aaaacacccaagacgtccataagggcaactgatgatgtggataatgtgatgcctgaaaaa
acacctgatgtggtctctaacgaggctaaatcatccccgatgataacgaagcctgatgtg
ggcccaaacataaaatctgaggaagctaattcgccccctgttagacctaggacggctcct
agtatgctacttccggagaaaggtaaggtctcacccatgcagagatcggtgaattctcga
cgtgtaatgcaagaaagagttcgaccttctccaatgctagttacgcgaagatctaatgct
tcccctcgcatgatacctgaaagaacaactaaaacctcacctgtcgtggtgggccccagg
catgatactcccagtcgcatgatgcttcagaaagctaaatcatctccatcactggatgat
ggcccacagactactgggagaggtttgatgtctaaaaaagatgacgatgttgcagatgat
ttactgcaaaatcatgatgtgtttgtaagtagcctccgggctcgcctaacaaaactccag
gtggtacggcatttttggggacaaaatgacaccaagggtgctattaatgctttgcggaag
ctgccagatcacgctccgactgtctttcaggttcaggcagacgtggtgaatgttctgatg
gaaagaatggagtccctcacacttgatcacttctcttctttgcttcctgtgcttttagat
ttactggatagcaaaactgagcggcatataagtgtatcactggaactgttactaaagctt
gtggcggtctttgggtctgtaatcagctcaacaatttcagcacctccaactgtgggtgtt
gatgttcatgcagaaaaaagacttgaacgctgcaatgaatgccacattcagcttcagaag
atccgcaaatgtctccctgatattataaggcgaggcggtttgccagcaagatgtgcacaa
gaactaaatattgttcttcagaaatcatga

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