Helianthus annuus (common sunflower): 110940824
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Entry
110940824 CDS
T05101
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110940824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110940824
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110940824
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_8
LRR_At1g61320_AtMIF1
F-box
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
110940824
NCBI-ProteinID:
XP_022038089
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Position
17:129245527..129251996
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AA seq
648 aa
AA seq
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MDPNRKRPKTAHRVDSVHVGVKQSQSTQLFPFSDEVGLALNGSQTVDRVDSSESTQLCSF
PDALNGSHMVDRVDSAGEWTQSSRFPDEVLERVLALIDSHKDRSSVSLVCKDWYNAERWS
RRHVFIGNCYSVSPEIVAARFPRIRSVTLKGKPRFSDFNLVPEDWGADVQPWLSAFSTAY
PFLEELRLKRMAVSDESLEFLATKFHGFKALSLLSCDGFSTDGLKAIATHCKKLTELDIQ
ENGIDDLGGHWLSCFPESLTSLEILNFASLNSEVSFDALEKLVARCKSLRVLKVNRNISL
DQLQKLLSHCPQLTELGTGTFMQELISGPVAEFKNMFSNCRNLITLSGLWDATPFYLPVI
YPACASLTFLNLSYATLRSDELANLLSHCKTLRRLWLLDTVGDKGLEAVGSCCPLLEELR
VFPADPFDQEILLGVTESGFVSVSRGCPKLRYVLYFCRQMTNAAVATIARNCPDFTHFRL
CIMNPGQPDYLTKEPMDEAFGAIVKTCTKLQRLAISGLLTDRTFEYIGKYAKNLETLSVA
FAGSSDLGMEYVLQGCQKLRKLEIRDCPFGNAALLSGLTKYESMRSLWMSACNVTMNACR
VLAKERPRLNVEVMRDEEGGDDSQAHKVYVYRTVAGPRRDAPPFVLTL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaatcggaaaagacccaaaacggctcaccgagttgactcggtccacgtcggt
gttaaacagtctcagtcgactcagttgtttccgttttcggacgaggtaggtttagcccta
aatggctctcaaacggttgaccgagttgactcgtccgagtcgactcagctatgttcgttt
ccggacgccctaaatggctctcacatggttgaccgagttgactcggccggtgagtggact
cagtcgagtcggtttccggatgaggtgttggagagagttctagccctaattgactctcac
aaggaccgtagctcggtgtcactggtgtgtaaggactggtacaacgcggaacggtggagc
cggaggcatgtgtttatcggtaactgctactcggtgtcaccggagattgtggcggctagg
tttccaagaatccggagcgtgactctgaaggggaaaccgaggttttcggattttaatttg
gtaccggaggattggggagctgatgtgcagccatggctgagtgctttctcaaccgcgtat
ccgttcctagaggagctccggttgaagcgaatggcggttagcgacgagagtttggagttt
ttagcgaccaagtttcatggttttaaagctctgtcactgttgagctgtgatgggtttagt
actgatggattgaaagctattgccactcattgcaagaagttgacagaattggatatccaa
gagaatggaatcgatgatcttggggggcattggttaagttgttttccggaaagcttaact
tcattagaaattctaaactttgcaagcttaaacagcgaagttagtttcgatgcccttgaa
aagctggttgctagatgcaaatcattaagggttttgaaagtaaaccggaatataagttta
gatcaactgcaaaagcttctttcacattgtccacagttgacggaacttggtactggaacc
tttatgcaagaactcatctcaggtcccgtcgctgagttcaagaatatgtttagtaactgt
agaaatttaatcactctttcgggtttatgggatgctactccgttttatcttccagttatt
tatcccgcatgtgctagtttgacttttttgaatctcagttatgcaactttacgtagcgat
gaactcgccaatcttctttcccactgcaaaactcttcgtcgcctctggcttcttgatact
gtaggtgacaagggtctagaagcggttggatcctgctgcccgttacttgaagaactgcga
gtcttcccagctgacccgtttgaccaagaaatcctacttggcgtgactgaatcagggttt
gtgtctgtttctcgtggctgcccgaagctccgttatgtcctctacttctgtcgccagatg
acaaatgctgctgtagccactattgcccgaaactgcccggatttcactcacttccgtctc
tgcataatgaacccaggccaaccagattatctgaccaaggagccaatggatgaagctttc
ggtgccattgtgaaaacttgtacgaagcttcagcggctcgcgatatccggtctgttaacc
gaccggacgttcgagtacatcgggaaatacgcgaaaaacctggaaacactttctgtggct
tttgcaggaagtagtgatttggggatggagtatgtattacaaggctgccagaaactaagg
aagctcgagatacgcgactgcccgtttggaaacgctgcgttgctttcgggtttgaccaaa
tacgagtcaatgcgatccctgtggatgtcggcttgcaatgtgactatgaacgcatgtagg
gtgttggctaaagaaagaccgaggttaaacgttgaggtcatgagagatgaggaaggtggt
gatgatagccaggctcataaagtttacgtttatcgaaccgttgctgggccgcgtagggat
gcaccaccatttgttctcaccctttag
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