Helianthus annuus (common sunflower): 110941492
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Entry
110941492 CDS
T05101
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110941492
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110941492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
PspA_IM30
CTK3
Laminin_I
FlgT_M
DUF3829
OEP
TEX13
Motif
Other DBs
NCBI-GeneID:
110941492
NCBI-ProteinID:
XP_022038823
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Position
7:complement(64707186..64712976)
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AA seq
440 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAEVVVTTWEKQFHSAEVVQKVPL
LYLANDILQNSKRKGNEFVSEFWKVLPGAVKDLTKKGNDHGKNVVTRLVNIWEERRVFGS
HAKNIKAVLLGEESPQPLEFSKKRSRSVKIVKRDSRSIRTKLSIGSTAERIVSAFHLVVS
EHHGEDEEMNKCKSAVHRVKKMEKDVDSALTNAKDPKRKSLSKELEEEEKLLKQCIEKLK
VVEANRLALVSQLRDALNDQESELENVRTQMQVAQAQTEEAKNMRERLDDEKYVADVKPS
SVDGSKKAAANIAAEVADRLAASTSSQYIMSSVLSTLAAEEGLSKTTSASVSKTEFMPSF
QTVLPNSQPQYHTIPNPHSHQFLQPPATSYPYGSVGIPPIPPPPSYMMVPLAHQRPPMAP
APVPPPQSGMMFYSHPHHSQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtgttcagcgaacagatacttgcagacaagctatccaagctcaacagcact
caacagtgtattgaaacgctgtctcattggtgtatattccaccgaagcaaagcagaagtg
gttgttacaacatgggagaagcagttccatagtgctgaggttgttcagaaggttcctctt
ttataccttgcaaatgatatccttcaaaacagcaagcgtaaaggaaacgaatttgtctcg
gagttctggaaggtcctacctggagctgtaaaagatcttactaaaaaaggcaatgatcat
gggaaaaatgtcgtaacccgactggttaatatatgggaagaaaggagagtgtttggatca
cacgcaaagaacattaaagctgtgttgcttggagaagaatcacctcaaccgctggagttc
tcaaaaaaacggtctcgttctgtgaaaattgttaagagagattcacgctctataagaaca
aaattgagcattggtagtacagcagagagaattgtgtcagcttttcacttagttgtgagt
gaacaccatggtgaagatgaagaaatgaataaatgcaaatctgcggttcaccgtgttaaa
aagatggagaaagatgttgattcggctttaacaaatgcaaaagatcccaagaggaagagt
ttgtccaaagaactggaggaagaagaaaagctgttgaagcagtgtatagagaagcttaaa
gttgtagaagcaaatagattggcccttgtctctcagttgcgtgatgcattgaatgaccag
gaatctgagttagagaatgtccgcacccaaatgcaggtggcacaagcacagacagaggaa
gcgaaaaacatgcgggaacgacttgatgacgagaagtatgtggcagatgtaaaaccatca
tctgttgatggatctaaaaaggccgctgctaatatagcggcagaagttgcagataggctt
gctgcttctacctcctctcagtacattatgtcatctgttttgtcgacacttgcagctgaa
gagggactgtctaaaaccacttctgcttctgtctccaaaaccgaatttatgccctctttc
caaacggttttaccaaactcgcaacctcaataccatacaattccaaacccacattcacac
caatttttgcaaccgcctgccacctcgtatccgtatggtagtgttggtataccgccgatc
cctccaccaccgtcttatatgatggttcctttggctcatcaacggccgcctatggccccc
gccccggtcccaccaccacagtctggaatgatgttttattcccaccctcatcattcgcag
tga
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