Helianthus annuus (common sunflower): 110941613
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Entry
110941613 CDS
T05101
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110941613
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
han01002
]
110941613
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110941613
03036 Chromosome and associated proteins [BR:
han03036
]
110941613
Peptidases and inhibitors [BR:
han01002
]
Metallo peptidases
Family M1
110941613
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110941613
Coactivators
SAGA/TFTC/STAGA complex
110941613
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110941613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Tim54
LIM_bind
Motif
Other DBs
NCBI-GeneID:
110941613
NCBI-ProteinID:
XP_022038962
LinkDB
All DBs
Position
5:142869687..142883030
Genome browser
AA seq
1372 aa
AA seq
DB search
MAKPRKHKTEDQKADNSEAVVKHQKLCLAIDLEKRRIYGYTELEVAVPENGIVGLHADNL
MIECVTVDGEPARFEIFPHYQQMDSDDRWCSVSSTNSAADAAGSVYVSCLERELVPNLLI
MCSNEATTKPVPEQLEETVQENGTQTSSESKQNVKLIRIDYWVEKIETGIHIEKDVMHTN
NQIRRARCWFPCMDDSLQRCCFDLEFTVANNLVAASTGTLMYQVLTNDDPPRKTYIYKIN
VPVAAQWISLAVAPFEIFPDRHNNLITHICLSHNLPKLRNTVGFLYSAYSHYEHYLSTKF
PFGSYTQVFIDPEMAISSLSLGASMNIFSSQILFDEKIIDQTIDTRIKLAYGLARQWFGV
YITAEAPNDEWLLDGLAWFLTDSFIKQFLGNNEARYRRYKANCAVCKADDSAATALSSSD
ASKALYGTQCIGFYGKIRSWKSVAVLQMLEKQMGPESFCKVLKNLVAPPKDTTHPLRTLS
TKEFRHLANEVGNLERPFLREFFPRWVGSSGCPVLKMGFSYNKRKNLVELAALRGCTATP
DSNPTYPNSKPDFVKREADAGWPGMMSIRVHELDGMYDHPVLPMAGETWQLLEIQCHSRL
ASKRFQKPKKGPKHDGSDDNADTVASVDMRSNSNDSPLQWLRADPEMEYLAEIHFNQPVQ
MWINQLEKDKDVVAQVQAITALELFPRLLSIVNALSNLLCDSQAFWRVRIEAAFALASTA
SEETDWAGLLHLIKFYKSRRYDEKIGLPKPNDFHDFAEYFVLEAIPHAVALVRAPDKKSP
REAVEFILQLLKYNENNGNPYSDVFWLAALVQSVGELEFGQQTVAFLSSLVKRIDRLLQF
DRLMPSYNGILTVSCIRTLTQIALKLSEFTPLDRIFDLIKPFSSSKTQWQVRIEAFRALL
DLEYHCKGIDAALILFIKYLEEEPSLRGQVKLGVHAMRLCQISGDADDDHGVMQGTLVAL
LRLLESPVAFNNVTLRHYLFCILQVLAGRPPTLCGVPRDETVIKGHTEICNELKNFFAAI
VNQSKPAEPSLDALMLPCDEPANETNTETNIVSITDNERTQPQDITLTLTEPDVVPKEGN
DNNEQKPPDLIILDSSEAHKEPDTVSNSQERKKPVLKIRMKQSSAASSRAEDVVDNAVLE
RSQGAHNGGDHGTSSSMSMDAPPQRNFIEPANVGNQNVDDVNSCHDLGSRVTASIGSAKL
PHDGHDDGVGDGDATLLKELQCTAESSKVQSNDVETVNHNKYISLRALNEGVDGLLAGPS
NQAVSGNKEKEKDKKKKDKEKKRKKKDKDDPEYLERKRLKKEKKRKEKELAKLMATPPLI
DAKQTESVKDEVAVARVTNVTTPVDGVVKRPEGTTSTHKLKIKIKNRTLTKP
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctcgaaagcataagaccgaagatcaaaaagccgataattcagaagctgtg
gtgaaacatcagaagctatgcctcgcaatcgatctcgaaaaacgtcgaatctacgggtat
accgagcttgaagtagctgtcccagagaatggtattgtggggttacatgctgacaatttg
atgattgagtgtgtaactgtcgatggagagccagcaaggtttgaaatattccctcactat
cagcaaatggacagtgacgacagatggtgctctgtttcttcaactaattctgctgctgat
gctgcgggttcagtatatgtttcatgtcttgaaagagaattggtgcccaatttgttgatt
atgtgctctaatgaggctaccaccaaaccagtgcctgagcagctagaagagacggtgcaa
gaaaatgggacccaaacatccagtgaatccaagcagaatgtaaaattgatccgcatcgat
tactgggtggagaagatagaaacaggaatacatattgaaaaggatgttatgcacacaaat
aatcagataagacgtgctcgttgttggttcccttgtatggatgatagtttacaacgttgc
tgctttgacttggagttcacggtggccaacaaccttgttgctgccagcactggaaccttg
atgtatcaggttttgaccaatgatgaccctccacgtaagacatacatctataaaataaat
gtacctgttgcagctcaatggatatctctggctgtcgctccattcgaaatatttcctgat
cgtcataataatcttataacacacatatgcttgtcacacaacttgccaaagcttcggaac
acagtgggatttctttatagtgcatacagccattatgaacattacctttccaccaaattt
ccatttgggtcatacacacaagtttttatcgacccggagatggcaatatcgtctttgagc
ttgggtgcatcaatgaatatctttagctcacaaattctttttgatgagaaaatcattgat
cagacgatagatacaagaataaaacttgcgtatggtcttgcaagacaatggtttggggtc
tatatcactgcagaggcaccaaatgacgagtggttattggatggacttgcttggttcttg
acggactcatttattaagcaatttctaggaaacaatgaagcacggtataggcgttataag
gcaaattgtgctgtttgcaaagcagatgatagtgctgcaactgccttgagctcttctgac
gcttccaaggctttgtatggaacacagtgcattggtttttatggaaaaattaggtcttgg
aaatctgttgcggttctacaaatgttggaaaagcagatgggtcctgagtcattctgtaaa
gtcttaaagaatctggttgcacctcctaaagatacaactcaccccttgagaacccttagc
acaaaagagtttcggcacttggctaatgaagtaggcaatcttgagcgcccatttctaaga
gagttttttcctcgctgggtgggttctagcggttgccctgttttaaagatggggttttca
tataacaaacggaagaacctggttgaattagcagctttgcgtgggtgtacagccacacca
gattcaaatcccacttatcccaattcaaaacccgattttgtgaaacgagaagctgatgct
ggatggcccggaatgatgagtatacgggttcatgaacttgatgggatgtatgatcatcct
gttttaccaatggcgggggaaacatggcagcttctagaaatacaatgccattctagactt
gcttccaaacgttttcaaaagccaaagaaagggccgaagcatgatggttctgatgataat
gcggatacagttgcctctgtagatatgcgttccaacagcaatgattcccccctgcaatgg
ctcagggccgaccctgaaatggagtatcttgccgagattcatttcaaccaacctgtacag
atgtggataaatcaattggagaaggacaaggatgttgttgctcaagtacaagcaattaca
gcactagagttgtttcctcgtcttctctcaattgtcaatgcgttaagtaatctcctctgc
gattctcaggcattttggcgagtgcggattgaggcggcttttgctctggctagcacagca
tctgaggaaactgattgggctggtttactgcacctgattaagttctataaaagtcgaaga
tacgatgagaagattggactcccaaagccgaatgacttccatgattttgctgagtatttt
gtacttgaggctattccgcatgcagttgctttggttagagcgccagacaaaaagagccct
agggaagctgttgagttcattttacaacttttgaagtacaatgaaaacaatgggaatccc
tactctgatgttttctggcttgctgcattggtccaatcagttggtgaacttgaatttgga
caacagacagttgcttttctatcttctcttgtgaaacgcatagaccggttattacagttt
gacaggctgatgccaagctacaatggaatcctgacagttagctgcattcgaacactaaca
caaattgcattgaagctttcagaattcacccctctagatcgtatctttgatttgattaaa
cccttttcctcttctaagacacaatggcaagttcgaatcgaagcattccgggcacttctt
gacctcgagtatcactgcaaaggaatcgatgcagcattgattttatttattaaatatttg
gaggaggagccttcattaagaggtcaagtgaaattgggtgtgcatgctatgcggttatgt
caaataagcggtgatgcggatgacgaccatggtgtgatgcagggaactctcgtggcacta
cttcgtcttcttgaaagcccagtagcatttaacaatgttacactacgccattatttattc
tgcattttacaagtcctggctggaagaccaccgacactttgtggagttcctagagatgaa
acggtgatcaagggccacacggaaatttgcaatgaacttaaaaacttctttgccgctatt
gtgaaccaatctaagcctgcagagccgtctttagatgcgcttatgcttccgtgtgacgag
cctgcaaatgaaacgaacacagaaacaaatatcgtttccattactgataacgagagaacc
cagcctcaagacattactctgacgttgaccgaacccgatgtagtaccaaaagaaggaaac
gacaataacgaacaaaagccaccagatttgatcattcttgattcttcagaagctcataaa
gaaccagatacggtttcaaacagtcaagaacgaaaaaaacccgtgttgaaaatcagaatg
aagcaatcatctgctgcttctagtagagccgaggatgttgtcgataatgctgttttagag
cgatctcaaggtgcccataatggcggtgatcacggaacaagtagttccatgtccatggat
gcaccaccgcaaagaaatttcatcgagcctgcgaatgtcggtaatcaaaacgttgatgat
gttaactcatgccatgatctcgggtcacgtgtaactgccagtatcggcagtgctaaacta
cctcatgatgggcatgatgatggtgtgggtgatggtgatgccacacttttaaaggaacta
cagtgtactgctgaatcaagtaaagttcaatctaatgatgtggaaaccgtgaatcataac
aagtacattagtcttcgagccctcaatgaaggtgttgatggtttgttggcgggaccctcg
aatcaagcggtttcgggtaataaagaaaaggagaaggataagaaaaagaaagacaaggaa
aagaaaagaaaaaagaaagataaagacgatccggagtatttggagcggaaacggttaaag
aaagaaaaaaagcgaaaagaaaaggaattggctaaactgatggcaacgccacctttaata
gatgcgaaacaaaccgaatctgttaaagatgaggtggcggttgctcgagtgacaaatgtc
acgacaccagtggacggtgtggtaaagcgtcccgaaggtactacttcaactcacaaactc
aaaataaaaataaaaaacagaacattgaccaaaccatag
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